Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1544 ATGGACTTTGAAGCTCAGAAAAGCTCCGATAATTCATCGACGTCTTCGAAGCTTATCCTTTACTCTTTCTGGAAAAGCTCCTGCTCATGGCGTGTTCGTTTTGCTTTGAATCTCAAAGGGCTCTCTTACGAGTACAGGGGAGTGAATCTTGATAGAGAAGAACAATTTAGTCCAGATTTTGAGCGTGTTAGTCCTCTTAATTACGTTCCTGTATTAGTAGATGGTTCCATTGTGGTTACGGACTCCTACGCGATTTTGCTGTATTTGGAAGAGAAGTATCCTCAAAAAGCACTATTACCTGCTGATGTTCAATCAAGATCTCTTAATCTTCAAGTGGCAAGCATTGTTACCTCAAGTATACAACCTCTTCATATGATGGGATTGCTGAAAACGATCAGAGAAAAAATTGGTGCAGAAGAGGCAATATTATGGGCACAATCTAACATAGAAAAAGGTTTCAAGGGCCTTGAGAAATTGCTGAAGGATTTTGCTGGTCAGTATGCCTTGGGAGATGAAGTGTATATGGCTGATGTATTTTTAGCCCCCCAAATTTCAGTTGCTATTAACAAGTTCAACATTGACATGTCCAAGTTTCCTACTTTAGCAAGGATTTATGAATCTTACAAGACCTTACCCGAATTCCAAGATTCATCGCCAGAAAGGCAACCGGATGCTTTCCGCTGA 684 40.5 MDFEAQKSSDNSSTSSKLILYSFWKSSCSWRVRFALNLKGLSYEYRGVNLDREEQFSPDFERVSPLNYVPVLVDGSIVVTDSYAILLYLEEKYPQKALLPADVQSRSLNLQVASIVTSSIQPLHMMGLLKTIREKIGAEEAILWAQSNIEKGFKGLEKLLKDFAGQYALGDEVYMADVFLAPQISVAINKFNIDMSKFPTLARIYESYKTLPEFQDSSPERQPDAFR 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 47913745 47916755 - evm.model.ptg000013l.1544 HCH7g1544 548829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1544 227 CDD GST_C_Zeta 104 222 IPR034330 -
HCH7g1544 227 Pfam Glutathione S-transferase, C-terminal domain 141 213 IPR004046 -
HCH7g1544 227 NCBIfam maleylacetoacetate isomerase 19 225 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
HCH7g1544 227 Gene3D - 99 226 - -
HCH7g1544 227 SFLD Main (cytGST) 19 208 - -
HCH7g1544 227 FunFam Maleylacetoacetate isomerase 101 227 - -
HCH7g1544 227 SFLD Glutathione Transferase (cytosolic) 19 208 IPR040079 -
HCH7g1544 227 SUPERFAMILY Thioredoxin-like 15 100 IPR036249 -
HCH7g1544 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 16 97 IPR004045 -
HCH7g1544 227 Gene3D Glutaredoxin 20 96 - -
HCH7g1544 227 PANTHER MALEYLACETOACETATE ISOMERASE 16 225 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
HCH7g1544 227 CDD GST_N_Zeta 18 90 IPR034333 -
HCH7g1544 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 102 227 IPR010987 -
HCH7g1544 227 FunFam Glutathione S-transferase Z1 16 100 - -
HCH7g1544 227 Pfam Glutathione S-transferase, N-terminal domain 20 96 IPR004045 -
HCH7g1544 227 SUPERFAMILY GST C-terminal domain-like 98 225 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0292 HCH-Chr2:41857012 HCH7g1544 HCH-Chr7:47913745 7.50E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1544 K01800 - csv:101213403 334.724