Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1557 ATGGATGCCAATTCTCCTCCTTCCGCCGCCACAATCATCAGTAAAACAACAAGCATCTCTTCGGAGAAGAGAAACCGCTCTATCTTCGATGTCTCGTCGAGCTTCTTCGATGCGTGCAATCTCCTTCGTTCTCCACATTCATACTTCTCATCAGCTATCGTCGGCTCCAGCGATAGCTCAAGCACTGAAAACCTAATCGATTCGGAGAATTACTCGAACGATTTCAGAGAAAGTTCCGTCGCAAATAGATGGACTTGCAATACATGCAAGGCCGAGTTCGAGTCTCTTATTGATCAGCGTTCTCATTTCAAATCCGACCTTCACCGGTTCAATGTGAAGTTAAGCATTGCTGGAAAGACTATTGTGAAGGAGGATGATTTTGACGAGTTGACATCTGATTCTTTCAAAGACTTTGATGTGTCGAGTATTTCGGGATCAGAAGATGAATCAGAGAAGGAAATTCACTCTCGGAATGAAGGGTTCAAGGGAATGAGTGATAGCGTGAACAAGAAGAGGTTGTTTGTGCATCTTCAAACAGGAGACAGAGTTTCGGTTTGGAAGTGTTTGCTCATGAATGAGTCCGAGAGTATTTCGTATGAAGATGATAAAACATCAGTCAGTGGTAATGGCATTCATGTGCAGTGTCTTAGAGAGAATGAAGTGATAGCGAGATTGAAAGCTGTAAATCATGAGCCAAGAGATGGAACCCGTTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTTGCTGGGTGTGTTTTTGATGGGAACTTGGTTGTTGCTCATAAAACATTTCACAGATATGTGGTAAGAGCTAAATCTGGAAAGAAGCAGTCATCTAAAGATGCAAGTGGCAAGTCAATCAGTTCCGCTGGAGCTTCACTTCGACGGTATAATGAACTAGCTCTGAAGAAGGAAATTCAAGATCTCTTTGCTGCTTGGAAGTCCTATTTTAATGCTTCATCTTGCATTTTTATTCATGCTCCTTCAAACAATCGGCAATTGCTTTTTAATGGTGAAAAACCATATTTCAGTAATCAAAATTCTGCTGTTCGAAATATTCCATTAACTGTTCGAAGGCCTACATTGAAAGAAGCCCGTCGTGTTTATGAACAATTGATACAAGTAGTTTATGAAATAGATGAGAAGGAAATGTTGTCTAGCACTGAACAAAATTCAATATTAAGTGCAGTTACTACAGAAAGTGTTACCCAAGATATGGATAAAGAGAAATTCACTGGAAATTTGGAAAAAGAGGCTTGTACATTTTCCGAAGAATCCGTTGAACACCCCATATTACATGAGACTGAAAGTGAAGTTATTGGTATTACTACCCCTTTGCATGAAGCATCACAGTCTGGAAATGCAGATAAGGTTTTTGAACTCCTTGAACAGGGTTTGGATCCTTGCATCAAAGACGAAAGAGGACGTACTCCTTACACGCTTGCAAATGAGAAGGAAGTACGGAATACTTTTAGAAGGTTTATGGCTTCAAACCTTGATAAATGGGATTGGAATGTTGCTAAGGTTCCAAGTGCTTTAACTAAAGAACTGGAGGAATCTCAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGAAAAAAGCTAGAGCAAAGGAATTGAAGAAATTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCTCAGGCTGATGAATCTCAAAAAGCTGAAATGGTGGAACAGAATAGAGGAGTCAGTTCTATTTTAAAGATACAGACTGAATCAACTGGTGGAAAACAGATATCTAAAGAGATGGCTCAGGCTTCTGAACGAGAAAAGAGAGCAGCGGCTGCCGAGAGTAGAATTGCCGCAGCTTTGGCAGCAGCGGCCATCAATGCTACCGCATCAACCGCTCCAAACAGCTCGCAAACTAAAAGCGGGTCAGCTGGAGACGTTAACTGTTCGTGTTGCAATACATCACTTGCTGGTAAAGTTCCTTTTCACCGGTATAATTACAAATATTGCAGCACAACATGCATGCACGTACACAGAGAGATCCTTGAAGGAGACTAG 2028 41.47 MDANSPPSAATIISKTTSISSEKRNRSIFDVSSSFFDACNLLRSPHSYFSSAIVGSSDSSSTENLIDSENYSNDFRESSVANRWTCNTCKAEFESLIDQRSHFKSDLHRFNVKLSIAGKTIVKEDDFDELTSDSFKDFDVSSISGSEDESEKEIHSRNEGFKGMSDSVNKKRLFVHLQTGDRVSVWKCLLMNESESISYEDDKTSVSGNGIHVQCLRENEVIARLKAVNHEPRDGTRLRIVLLASGGHFAGCVFDGNLVVAHKTFHRYVVRAKSGKKQSSKDASGKSISSAGASLRRYNELALKKEIQDLFAAWKSYFNASSCIFIHAPSNNRQLLFNGEKPYFSNQNSAVRNIPLTVRRPTLKEARRVYEQLIQVVYEIDEKEMLSSTEQNSILSAVTTESVTQDMDKEKFTGNLEKEACTFSEESVEHPILHETESEVIGITTPLHEASQSGNADKVFELLEQGLDPCIKDERGRTPYTLANEKEVRNTFRRFMASNLDKWDWNVAKVPSALTKELEESQAAKQAEKDAKKKARAKELKKLKKEKAKKAQAQADESQKAEMVEQNRGVSSILKIQTESTGGKQISKEMAQASEREKRAAAAESRIAAALAAAAINATASTAPNSSQTKSGSAGDVNCSCCNTSLAGKVPFHRYNYKYCSTTCMHVHREILEGD 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48033143 48037854 - evm.model.ptg000013l.1557 HCH7g1557 548842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1557 675 Pfam Bacteroidetes VLRF1 release factor 240 376 IPR041175 -
HCH7g1557 675 SUPERFAMILY Ankyrin repeat 442 500 IPR036770 -
HCH7g1557 675 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 22 673 IPR047139 GO:0030433(PANTHER)
HCH7g1557 675 Gene3D - 422 505 IPR036770 -
HCH7g1557 675 ProSitePatterns Zinc finger C2H2 type domain signature. 86 108 IPR013087 -
HCH7g1557 675 Coils Coil 518 561 - -
HCH7g1557 675 MobiDBLite consensus disorder prediction 142 161 - -
HCH7g1557 675 Pfam Vms1-associating treble clef domain 638 670 IPR041540 -
HCH7g1557 675 ProSiteProfiles Ankyrin repeat profile. 445 474 IPR002110 GO:0005515(InterPro)
HCH7g1557 675 MobiDBLite consensus disorder prediction 542 566 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1557 K26089 - csv:101216211 905.59