Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH7g1560 | ATGGAATTAAACATCAATTTCTTCACAATCTTTTCCTTCATATTCTTTACAATCTTCCTCTTCTTCCTCGCCTTCTCAATTCTCCTTCTCAGAACAATAGCCGGAAAATCCATAACGAACTCCGATTACCCGCCGGTGTACGGCACCGTGTACGGCCAGATTTTCTACTTCAATAACTTATTCGATCACCTAACCGATGTGGTCAAGAAAAAGGGCACGTTCAGGCTGCTAGCGCCGGCGTATAGCGAAATTTACACGACGGATCCAAGAAATATAGAGCATATATTGAAGATCAAATTTGACAAATATTCGAAAGGAAGTATTAATAAAGAAATCCTCGGGGATTTGTTTGGAGAGGGAATTTTCGCTGTTGATGGAGATAAATGGAAGCAGCAGAGGAAGCTTGCGAGCTATGAATTCTCGACTAGGGCTCTTAGAGATTTTAGCTGCTCGGTTTTTAGAACTTCTGCTGCTAAACTCGTTCAAATTCTTGACGAGTTTTCCGGTGCGGGTCGGGCTTTTGATATCCAGGATTTGGTAATGAGATGCGCTTTGGACTCCATATTCAAAGTTGGGTTTGGTGTGGATTTGAATTGCTTGGAGGAATCAAGCAAAGGGAGTGAATTCATGAAAGCTTTTGATGATTCCAGTGCTCTTATTTGTTGGCGGGATTTGGATCCTCTGTGGAAATTCAAAAGATTTCTTAACATTGGTTCTGAAGCTTCCCTAAAGAAGAATGTTGAAGTTATTGATGGTTTTGTGCACCAATTGATCAGCAACAAGAGGAAATTGCTTCAACAAAGAAATTATAATGATAAGGAGGACATACTTTCGAGATTTCTGATGGAAAGCGAGAAGGATCCGATGAGAATGAACGATCGATATCTAAGAGATATAGTCCTCAATTTCATGTTGGCTGGTAAAGATTCAAGTGGAGGTACTCTATCCTGGTTCTTCTACATGCTATGTAAGAACCCTCTAATACAGGAAAAAGTTGCAGAAGAAGTGAGGAGAGTTGTTGGGGGTGAAGGAGAAGAAGACTCTGACGTGAGTGTGTTTATGGCAAATTTAACTGATCCAGCTCTTGAGAAAATGCACTATCTTCATGCTGCATTGACAGAGACCTTGAGGCTATATCCTGCAGTTCCTTTGGATGGGAGAAGTGCAGACATAGATGACATCCTTCCTGATGGCTATAGACTGAAAAAAGGAGATGGAGTTTACTACATGGCTTATTCCATGGGCAGGATGCCTGACCTTTGGGGAGAAGATGCTGAGGATTTCAAACCTGAAAGATGGCTTCAAGATGGGATTTTTCAACCAGAATCCCCTTTCAAATTCATTGCATTTCATGCCGGTCCTCGAATGTGTTTGGGAAAAGACTTTTCTTATCGGCAAATGAAGATAGTATCGGCTACTTTGCTACAATTCTTTCGTTTCAAATTAGCCGATGAAACAAGAAAGGTAACTTATAGGATCATGCTTACCCTTCACATTGATGGAGGTCTCCCACTTCTTGCCATTCCAAGAATAAGAAAATTTACGTCATGA | 1551 | 40.94 | MELNINFFTIFSFIFFTIFLFFLAFSILLLRTIAGKSITNSDYPPVYGTVYGQIFYFNNLFDHLTDVVKKKGTFRLLAPAYSEIYTTDPRNIEHILKIKFDKYSKGSINKEILGDLFGEGIFAVDGDKWKQQRKLASYEFSTRALRDFSCSVFRTSAAKLVQILDEFSGAGRAFDIQDLVMRCALDSIFKVGFGVDLNCLEESSKGSEFMKAFDDSSALICWRDLDPLWKFKRFLNIGSEASLKKNVEVIDGFVHQLISNKRKLLQQRNYNDKEDILSRFLMESEKDPMRMNDRYLRDIVLNFMLAGKDSSGGTLSWFFYMLCKNPLIQEKVAEEVRRVVGGEGEEDSDVSVFMANLTDPALEKMHYLHAALTETLRLYPAVPLDGRSADIDDILPDGYRLKKGDGVYYMAYSMGRMPDLWGEDAEDFKPERWLQDGIFQPESPFKFIAFHAGPRMCLGKDFSYRQMKIVSATLLQFFRFKLADETRKVTYRIMLTLHIDGGLPLLAIPRIRKFTS | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 48046493 | 48049885 | - | evm.model.ptg000013l.1560 | HCH7g1560 | 548845 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH7g1560 | 516 | Pfam | Cytochrome P450 | 58 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | Gene3D | Cytochrome P450 | 45 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | E-class P450 group I signature | 369 | 387 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | P450 superfamily signature | 370 | 381 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | CDD | CYP86A | 73 | 503 | - | - | |
| HCH7g1560 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH7g1560 | 516 | SUPERFAMILY | Cytochrome P450 | 52 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH7g1560 | 516 | PANTHER | CYTOCHROME P450 | 26 | 503 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH7g1560 | HCH-Chr7:48046493 | HCH7g1563 | HCH-Chr7:48070636 | 2.00E-135 | dispersed | |
| HCH7g1560 | HCH-Chr7:48046493 | HCH7g1561 | HCH-Chr7:48050728 | 1.00E-288 | tandem | |
| HCH11g1166 | HCH-Chr11:43845654 | HCH7g1560 | HCH-Chr7:48046493 | 5.90E-132 | wgd |
Pathway information