Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH7g1637 ATGGCATCAGGTTCGGGAGGGGTGTCGATGTCAGAGACGGATGATTTCGAGGCATCGGTGACTGATGTTGAGCCTCTAAAGAGGGCATGGCGAAATGAAAAGGCTGCTCCTGAAATTCTGCACTATGAGACGGCTCTGATTGGGAGAATCAAAGAGCAGATTCAATTAATGGAAGAAACTATAGAGGAATATTCAAGAAGTGGTACTGATCCCTTAATTGTATCACTCTATCAAATGGATTTTGATAGGACTCAATTTCTCTTGAGATCTTATATCAGGATTCGTTTACAGAAGATTGAGAGATACATGTTCTATATCTTAGAGTCAGATGAGCAATTAAGACGTCTTTCTAAAGAAGAGAGAACGTTTGCTCAAAGGTGTTGTCAAGATATGAAAAATCATTTGGACGAGAGCGTTCTATCAAAAATGCCTAATAATTATGATGACATTTTGAGGCAATCCATAATAAGTGAAGCGGATGACATGGTTCCAAAGCCTCCACTGGACACATTTGTGGTCTGCAAAAGCAAGGAATACATTGAACATATACAGCTCGAGGATGAGGAAGAGAGGGCATCTAGTAAGATAGAGGAACCTTTTGAGATGGAGGCTAATGTATTACACATTATTCGCTACAAGCCCATTAAAGCTCTCGTTGAGAGTGGGAGAATCGATTTGCTCTAA 684 40.35 MASGSGGVSMSETDDFEASVTDVEPLKRAWRNEKAAPEILHYETALIGRIKEQIQLMEETIEEYSRSGTDPLIVSLYQMDFDRTQFLLRSYIRIRLQKIERYMFYILESDEQLRRLSKEERTFAQRCCQDMKNHLDESVLSKMPNNYDDILRQSIISEADDMVPKPPLDTFVVCKSKEYIEHIQLEDEEERASSKIEEPFEMEANVLHIIRYKPIKALVESGRIDLL 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48525230 48527551 + evm.model.ptg000013l.1637 HCH7g1637 548922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH7g1637 227 SUPERFAMILY PriA/YqbF domain 168 227 - -
HCH7g1637 227 Gene3D - 10 217 - -
HCH7g1637 227 FunFam DNA replication complex GINS protein SLD5 9 217 - -
HCH7g1637 227 Coils Coil 47 67 - -
HCH7g1637 227 CDD GINS_B_Sld5 166 227 IPR031633 -
HCH7g1637 227 CDD GINS_A_Sld5 22 140 IPR038749 -
HCH7g1637 227 PANTHER SLD5 PROTEIN 12 227 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
HCH7g1637 227 Pfam GINS complex protein helical bundle domain 72 136 IPR021151 -
HCH7g1637 227 Pfam DNA replication complex GINS protein SLD5 C-terminus 166 227 IPR031633 -
HCH7g1637 227 PIRSF GINS_Sld5 3 227 IPR008591 GO:0006261(InterPro)
HCH7g1637 227 SUPERFAMILY GINS helical bundle-like 21 152 IPR036224 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH7g1637 K10735 - csv:101210888 366.696