Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH7g1726 | ATGGAGTCTTCTTCTGATAATGGTGCTGATTTTGTAGAGAAAGATCCAACTGGTAGATATGTTCGGTACAATGAAATCTTGGGAAGGGGAGCTTTCAAGACAGTTTATAAGGCATTTGATGAAGTTGATGGAATTGAAGTTGCCTGGAACCAAGTAAGGATCGATGACTTCTTGCGGTCACCTGAAGATTTGGAGAAATTGTATTCCGAAGTACATCTACTCAAATCATTAAAACATGAGAATATCATTAAGTTCTATAATTCATGGGTGGATGATAAGAAGAAAACAGTCAACATGATCACCGAGCTCTTCACGTCTGGGAGTTTGAGGCAATATCGTAAAAAGCATAAAAATGTTGATATGAAGGCCATAAAGAATTGGGCACGGCAGATTCTTCGTGGGTTGGTCTATCTTCACAGTCATAATCCTCCTATTATTCATAGAGACTTGAAATGTGATAATATTTTTGTTAATGGAAATCAAGGAGAGGTTAAAATCGGAGATCTTGGATTAGCAATTGTTCTGCAGCAGCCTACTGCTCAAAGTGTAATTGGAACTCCTGAGTTTATGGCTCCCGAGCTTTATGAAGAGGAGTATAATGAGCTTGTTGATGTATATTCTTTCGGGATGTGCATGCTGGAGATGGTTACTTTTGAGTATCCGTATAATGAATGCCGAAATCCAGCTCAAATTTATAAGAAAGTTACCTCTGGTATCAAACCTGCTTCCCTTGCTAAGGTGAGTGATCCGCAAGTGAAGGAGTTTATCGATAGATGTCTGGTTCCCGCACATGAGAGATTGTGTGCAAAGGACCTTCTTAAAGATTTATTCCTTCAAGTTGAGAACCCAAAGGAGTCAATACGTGATCCCCTGCAGTTACCTAACCATGTTCCCAAAGCAATTAATTTGTTCAAGTCTGGGCCCCTTTCCATGGACATAGACATTGATTATAGACAACATTCTGTAAGCACTTGTACAGGAAGCAACTCTGAGAGTCCACACTTTCCAATTATGGAATTTCAGAGGATACATAAGGACAATGAGTTTAGGTTACGCGGGCATCGGAATGATGACAACTCGGTGGCATTAACCTTGCGTATTGCAGACTCACATGGTCGAGTGAGGAATATACATTTTATATTTTATCTCGATTCGGATACTGCACTATCAGTAGCAGCTGAAATGGCCGAGCAATTGGAGTTGGTAGATCATGATGTGGACTTCATTGCTGAATTTATTGATTACTTGATCACAAAACTTATACCTGGTTGGAAGCCCTTGTCTCATTATTCCACAAGTGGAGCAATAAATCTCTGTGGTAGCTTCCCTATCTTGAAAGATGCCAAATCATCTGTTGCATCTCCTTGGGATGCAATGTTAACCGAAGTTCATGCGGGGGTGGTCGAACAAGACGCTTTCTCTGGATTATTAGCAAGCACTCAAAAAGAGTGCTTGCAATCTGATGAAGTTGGCTGGGCAGATATCCCTGATAGTCATATTTGTAACAGTGACTGGCATTCTTCTCCAAGTTTGGCTAATTTTGAAGACCAGCATTCACAAGCGTCGGTTGCATCGGAGATACTGGTCGAAGATGGTTCCACCAAAAGTGGTAAAGCGGTGAATTCTGCTGGTTCTAACATCGATGGAAACTCGAAAGGTTCTAGAGGTTCTAGTTGGTCCATTGCTGAACTAGAGCTCCACGATCGAAACGCTGGCGACCCCGAAACTTTCACACCGTTGAATGATTTTGTGAAGAACTCAGTTATGTCATTGCCTGCTACAAGTGAAGTGTCTAATGTGATGAGCTTGACAAGCAGCTGTTCTTCACTATCCTTAGCAGACAAGGATCTGGATGCTGAACTGAAGATGGAAATCAATACCATCGAGACGCAATATCGGCAGTGGTTCGAAGAGCTATCCCGGATGAGGGAGGAGGCACTGGAGGGTGCCAGAAAGAGATGGATTGCAAAGAAGAAACTTGTTCATTAA | 1989 | 41.73 | MESSSDNGADFVEKDPTGRYVRYNEILGRGAFKTVYKAFDEVDGIEVAWNQVRIDDFLRSPEDLEKLYSEVHLLKSLKHENIIKFYNSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLVYLHSHNPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVLQQPTAQSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYNECRNPAQIYKKVTSGIKPASLAKVSDPQVKEFIDRCLVPAHERLCAKDLLKDLFLQVENPKESIRDPLQLPNHVPKAINLFKSGPLSMDIDIDYRQHSVSTCTGSNSESPHFPIMEFQRIHKDNEFRLRGHRNDDNSVALTLRIADSHGRVRNIHFIFYLDSDTALSVAAEMAEQLELVDHDVDFIAEFIDYLITKLIPGWKPLSHYSTSGAINLCGSFPILKDAKSSVASPWDAMLTEVHAGVVEQDAFSGLLASTQKECLQSDEVGWADIPDSHICNSDWHSSPSLANFEDQHSQASVASEILVEDGSTKSGKAVNSAGSNIDGNSKGSRGSSWSIAELELHDRNAGDPETFTPLNDFVKNSVMSLPATSEVSNVMSLTSSCSSLSLADKDLDAELKMEINTIETQYRQWFEELSRMREEALEGARKRWIAKKKLVH | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 49040484 | 49043427 | + | evm.model.ptg000013l.1726 | HCH7g1726 | 549011 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH7g1726 | 662 | CDD | STKc_WNK | 19 | 278 | - | - | |
HCH7g1726 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 279 | IPR011009 | - | |
HCH7g1726 | 662 | MobiDBLite | consensus disorder prediction | 534 | 556 | - | - | |
HCH7g1726 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 104 | 283 | - | - | |
HCH7g1726 | 662 | Coils | Coil | 625 | 645 | - | - | |
HCH7g1726 | 662 | Gene3D | - | 359 | 424 | - | - | |
HCH7g1726 | 662 | Pfam | Protein kinase domain | 24 | 277 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g1726 | 662 | FunFam | Probable serine/threonine-protein kinase WNK1 | 6 | 102 | - | - | |
HCH7g1726 | 662 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 7 | 650 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
HCH7g1726 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 102 | - | - | |
HCH7g1726 | 662 | SMART | serkin_6 | 21 | 278 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH7g1726 | 662 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH7g1726 | 662 | FunFam | probable serine/threonine-protein kinase WNK9 | 104 | 283 | - | - | |
HCH7g1726 | 662 | ProSiteProfiles | Protein kinase domain profile. | 21 | 278 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH3g0374 | HCH-Chr3:2372024 | HCH7g1726 | HCH-Chr7:49040484 | 1.40E-143 | dispersed | |
HCH5g0644 | HCH-Chr5:4601707 | HCH7g1726 | HCH-Chr7:49040484 | 9.50E-164 | dispersed | |
HCH7g1726 | HCH-Chr7:49040484 | HCH8g0180 | HCH-Chr8:6924322 | 1.30E-131 | dispersed | |
HCH7g1726 | HCH-Chr7:49040484 | HCH10g0772 | HCH-Chr10:7501607 | 5.50E-138 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81670 | PF00069 | Pkinase | 1.70E-52 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH7g1726 | K08867 | - | csv:101204101 | 977.622 |