Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH8g0033 | ATGGCAGGAGGTGGTGGTGATGTTATGCCATTATTGGTTATGGTTGTTGTTCAATTTCTATATGCAGGATTGAACATTGTATCAAAGGTAGCTCTGGATTCTGGTATGAACCCACTTGTTCTTGTTGCTTACAGGCAGCTGTTTGCTACCATTTCCATAGCTCCTTTTGCTTTTTGGATAGAGAGAAAAGAGAGACCCAAGATTACCAAATCTATTCTATTTCAGATTTTTCTGTGTTCCTTAACTGGGGCAACAGCAAACCAGGTTTTTTTCTTTGTTGGGCTAAAATATTCAAGTCCCACAATTGCATGTGCATTGACCAATATACTCCCAGCTGCAACTTTTATCCTTGCTGTAATTTTCAAGACAAGAATCTGTGAGCATCAAGACAAGGGCAGGTGGAGCTAA | 408 | 39.95 | MAGGGGDVMPLLVMVVVQFLYAGLNIVSKVALDSGMNPLVLVAYRQLFATISIAPFAFWIERKERPKITKSILFQIFLCSLTGATANQVFFFVGLKYSSPTIACALTNILPAATFILAVIFKTRICEHQDKGRWS | 135 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 1313879 | 1314900 | + | evm.model.ptg000008l.1502 | HCH8g0033 | 549131 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH8g0033 | 135 | PANTHER | WAT1-RELATED PROTEIN | 12 | 123 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
| HCH8g0033 | 135 | Pfam | EamA-like transporter family | 11 | 122 | IPR000620 | GO:0016020(InterPro) | |
| HCH8g0033 | 135 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 44 | 121 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH8g0033 | HCH-Chr8:1313879 | HCH9g0974 | HCH-Chr9:7272502 | 1.20E-28 | dispersed | |
| HCH8g0032 | HCH-Chr8:1159736 | HCH8g0033 | HCH-Chr8:1313879 | 2.00E-60 | tandem |
Pathway information