Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0076 ATGAGTCAGACAGAAGTATCAAGGATAAAACCTGCTCTCGTTCCACTTGCTACTTTGATTGGTCGCGAGCTTAGGAACGAGAAGGTAGAGAAACCTTTTATCAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGATTACTTTTTGATTAAACTTGATTGCCAGCGGATTCCTGGAAATCCGTCTACTACGTTTTCTGTCTTTGCGATTTTCGATGGGCATAATGGCATATCAGCTGCCATCTTCGCAAAGGAGCATTTACTGGCTAATGTTCTAAGTGCGATTCCTCAAGGGGCCAGTCGGGAAAAATGGCTTCAAGCCCTTCCTCGGGCATTAGTTGCTGGTTTTGTTAAAACTGACATTGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACTGTTGCATCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACAGTTGATCATAGGCTGGAGGAAAATGAAGAAGAAAGGGAACGTGTGACTGCAAGCGGAGGTGAGGTAGGGAGGCTCAATGTTTTTGGTGGCAATGAGGTTGGTCCCCTCCGCTGCTGGCCTGGTGGATTATGTCTTTCTAGGTCCATTGGTGATACAGATGTTGGGGAATATATTGTTCCAATACCACATGTTAAGCAAGTGAAGCTTTCTAATGCTGGTGGAAGACTAATAATCGCTTCTGATGGTATATGGGATGCTTTATCTTCTGATATGGCGGCAAAGGCTTGTCGAGGTTTACCTGCAGAGCTTGCTGCTAAGCTGGTTGTGAAGGAGGCTTTACGGTCGAGGGGTCTGAAGGATGATACAACTTGCTTAGTTGTTGATATCATCCCGTCAGAACAACCTACATTACCACCAACTCCAAGGAAGAAACAAAATGTGCTCACCTCACTATTTGGGAAGAAATATCAAAATTCTATGGGCAAAGCTGCAAATAAACTTTCTGCTGTGGGAGTTGTGGAAGAATTGTTTGAAGAGGGTTCTGCTATGCTTGCTGAAAGGTTAGGCAAAGATTTTCCTTCAGATGCAAACTCAGGGATCTTCAAATGTGCAGTCTGCCAAGTGGACCAACCCCCAAATGAAGGTTTCTCCATGAACTCGGGGCCTTTCTTTTCACCGGCATCAAAGCCGTGGGAAGGCCCTTTCCTCTGTGCAACTTGTCGAAGAAAGAAAGACGCCATGGAAGGAAAAAGGCCAAGCAAACCCATAAGAACCTCTTAA 1284 45.17 MSQTEVSRIKPALVPLATLIGRELRNEKVEKPFIKYGQAALAKKGEDYFLIKLDCQRIPGNPSTTFSVFAIFDGHNGISAAIFAKEHLLANVLSAIPQGASREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKACRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPTLPPTPRKKQNVLTSLFGKKYQNSMGKAANKLSAVGVVEELFEEGSAMLAERLGKDFPSDANSGIFKCAVCQVDQPPNEGFSMNSGPFFSPASKPWEGPFLCATCRRKKDAMEGKRPSKPIRTS 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3901235 3903432 + evm.model.ptg000008l.1459 HCH8g0076 549174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0076 427 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
HCH8g0076 427 Pfam Protein phosphatase 2C 63 280 IPR001932 -
HCH8g0076 427 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
HCH8g0076 427 SMART PP2C_4 23 295 IPR001932 -
HCH8g0076 427 FunFam probable protein phosphatase 2C 5 35 302 - -
HCH8g0076 427 Gene3D - 38 302 IPR036457 -
HCH8g0076 427 CDD PP2Cc 43 297 IPR001932 -
HCH8g0076 427 SMART PP2C_SIG_2 51 297 IPR001932 -
HCH8g0076 427 SUPERFAMILY PP2C-like 43 297 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0636 HCH-Chr12:3825432 HCH8g0076 HCH-Chr8:3901235 4.10E-142 dispersed
HCH1g0751 HCH-Chr1:56323628 HCH8g0076 HCH-Chr8:3901235 4.40E-173 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0076 - - - 0.0