Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0129 ATGGCATTCTCAAAACTCTCTCTCTCTCTAATCATTCTCTCAATTTTCCTCTTCTTCATTCTCTTCCCTTCTAATCCCACTTCTCCTTCTTCTTCTTCAATCACAAAAAGATCTCTAATCTCCAATTCCAATTCATCTTGTTCCTCTGCTCATTATAATTACTACTTATATTTCCATTTCTGTCTCTTCAATGAAAACCCTTCTCTCTCTATCCCTTTTCTCTCTCTCCTCCTTCTTTTCTACTTCTACATTCTCATCAAAACTGCCCAAGATCACTTCTCCATTCTCACTTCCAAGCTTTCTTCACATCTCAATTTGTCTCCTAGTATGGCTGCTGTTACTCTTTTAGCATTGGGCAATGGTGCTCCTGATGTCTTTGCATCTGTTGCTGCTGTCCGCGCCGGCCAGTACCGAACTGGGTTCGGTGCTATTCTATCGGCCGGGACGTTTGTTTCCGCTTTCGTTGTCGGGTTTGTGGCGATTTACGCCGCTCCCTTTTCGGTTAATCCGACGCAATTTGTGAGGGACGTGTTGTTTTATTTGATTGGTGCATTGTTCTTGTTTTATGTTTATCTTAGTGCTGAGATTTTCTTTTGGCAAGCTCTTGGTTTTGTTGGATTTTATCTGTTTTTTGTTGGGTTTGTGTTTTGGATGGATTTGGGAATGGGAACTGGGAAAGCTAAGACTGGGGGTGATATGGGAGTGGTAAAAGAAGATCAGGTCGAACGGGGTGCGGCGCTGCGAGATTGCGAGATTGGAGAAGGCTACGTAAATGTGGATGAAGAAGAAAAAACCAATTTTGGTTTTTGGGATGCTCTTTGGATGATCCCGAAAGTGTGGGGAGCTCCTGTCTCGTTTCTTCTAAAGCTGACCATTCCCCAGCCATCACCTTCTGAATGGAGCAGATTCCATGCATCAGCAAATATTTCTCTATGTCCGGTTGCCCTTTTATATGCCTGTAACTCATTCATGCCTTTTAATTATCCCATTGTTTTCCTCCTACCGCGTATTCATTTCCCTCTTTGGTTGGTGGTACTCTTAGCAAGCTCCTCTCTTGCAATTCTTCACTTTGTCATGGAAACAGAGCCCCCGAAAACCGAGCAAGTTCCAGTAGTGCTTATAGCATTCGTTATGAGTGTATTTTGGATTTCGACCATCGCTGGAGAACTGATGAACTGTCTGGAAGCATTTGGAGTACTTCTCAAACTTCCACCGGCAATTCTTGGGCTCACTGTGCTTGCCTGGGGAAATTCAGTTGGAGATCTTGTTGCTGATGTTGCTCTTGCAAAAGCCGGTCAGCCTTTGCTGGCTATGGCTGGGTGCTTTGCTGGGCCAATGTTTAACATGCTTGTGGGGCTCGGAACAGCTTTGGTTTTACAAACAGCAAACAACTATCCAGAGGCCTATCAGCTTCATTTTCACATGGGAATTGTGATTGCATTTGTATTCCTACTTCTGAGTCTGATGGGTTCCCTCCTTGTAGTTATTTGGTGCAGGTTCCGGGTGCCAAGATTTTGGGGATTCTGCCTTGTGGGTCTCTATATTGTTTTCATGGCTATCAGCCTAGTGATGGCCAAGTTTTCTTCATGA 1590 44.09 MAFSKLSLSLIILSIFLFFILFPSNPTSPSSSSITKRSLISNSNSSCSSAHYNYYLYFHFCLFNENPSLSIPFLSLLLLFYFYILIKTAQDHFSILTSKLSSHLNLSPSMAAVTLLALGNGAPDVFASVAAVRAGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPTQFVRDVLFYLIGALFLFYVYLSAEIFFWQALGFVGFYLFFVGFVFWMDLGMGTGKAKTGGDMGVVKEDQVERGAALRDCEIGEGYVNVDEEEKTNFGFWDALWMIPKVWGAPVSFLLKLTIPQPSPSEWSRFHASANISLCPVALLYACNSFMPFNYPIVFLLPRIHFPLWLVVLLASSSLAILHFVMETEPPKTEQVPVVLIAFVMSVFWISTIAGELMNCLEAFGVLLKLPPAILGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVLQTANNYPEAYQLHFHMGIVIAFVFLLLSLMGSLLVVIWCRFRVPRFWGFCLVGLYIVFMAISLVMAKFSS 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5289678 5292111 - evm.model.ptg000008l.1406 HCH8g0129 549227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0129 529 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 41 527 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
HCH8g0129 529 Pfam Sodium/calcium exchanger protein 373 522 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
HCH8g0129 529 Pfam Sodium/calcium exchanger protein 75 217 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
HCH8g0129 529 Gene3D - 106 230 IPR044880 -
HCH8g0129 529 Gene3D - 305 523 IPR044880 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g0129 HCH-Chr8:5289678 HCH9g1386 HCH-Chr9:45659237 2.00E-42 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0129 K13754 - csv:101209909 764.222