Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH8g0147 | ATGGCTGGAAGTAATGAAATCAATCTCAATGAGTCTAAGATGGTGGTTCCACTAAATACTTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGGCCCGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTTGACCGGAAAGTTCCAGCAAATGCTAACCCTGTTGATGGGGTTTTCTCGTTTGATGTCATTATTGATCGTGCTACTAGTCTCCTATGCAGAATCTATCGACCGGCCAATGGAAGTGAACCGCAGACTAATATTGTTGATCTTGAGAAGCCAGTGGGTTCTGGTGTTGTTCCTATTATAGTTTTCTTTCATGGTGGAAGCTTTGCACATTCATCTGCTAACAGTGCTATCTACGATACTCTATGTCGGCGATTGGTCAGCATTTGCAAGGCTGTTGTTGTCTCTGTGAACTACAGACGTGCACCTGAAAATAGGTATCCATGTGCTTATGATGATGGGTGGACCGCTCTTAAGTGGGTAAATTCAAGGTCATGGCTTCAAAGTAAAGACTCGAAGACCTATATTTATTTGGCTGGTGATAGTTCTGGTGGAAACATTGTACACAATGTTGCAACAAAAGCCGTGAAATCAGGAATTGAAGTATTGGGTAATATACTTCTCAATCCTATGTTTGGAGGACAGGAAAGAACTGAATCTGAGACTCGATTGGATGGGAAGTATTTTGTCACCGTCCGGGATAGAGACTGGTATTGGAGAGCTTTTCTCCCTGAAGGGGAAGACAGAGACCACCCAGCATGTAATCCCTTTGGCACCAGGGGTACAAGCCTTGAAGGGATCGACTTCCCCAAGAGCCTTGTTGTGGTGGCTGGTTTAGATCTCGTCCAGGACTGGCAATTGGCTTATGTCAAAGGGCTTGAGAAGGCTGGCCAAAAGGTGAAACTTTTGTACCTTGATCAGGCAACAATTGGCTTTTATTTGCTACCAAATAACGATCACTTCTATACCGTTATGGACGAGATAAGTGACTTTGTGAGTTCTGACTGTTAA | 1032 | 43.8 | MAGSNEINLNESKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIIDRATSLLCRIYRPANGSEPQTNIVDLEKPVGSGVVPIIVFFHGGSFAHSSANSAIYDTLCRRLVSICKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHNVATKAVKSGIEVLGNILLNPMFGGQERTESETRLDGKYFVTVRDRDWYWRAFLPEGEDRDHPACNPFGTRGTSLEGIDFPKSLVVVAGLDLVQDWQLAYVKGLEKAGQKVKLLYLDQATIGFYLLPNNDHFYTVMDEISDFVSSDC | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5800192 | 5801735 | + | evm.model.ptg000008l.1388 | HCH8g0147 | 549245 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH8g0147 | 343 | FunFam | Gibberellin receptor GID1 | 1 | 341 | - | - | |
HCH8g0147 | 343 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative serine active site. | 183 | 195 | IPR033140 | - | |
HCH8g0147 | 343 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative histidine active site. | 108 | 124 | IPR002168 | GO:0016787(InterPro) | |
HCH8g0147 | 343 | Gene3D | alpha/beta hydrolase | 1 | 341 | IPR029058 | - | |
HCH8g0147 | 343 | Pfam | alpha/beta hydrolase fold | 108 | 320 | IPR013094 | GO:0016787(InterPro) | |
HCH8g0147 | 343 | SUPERFAMILY | alpha/beta-Hydrolases | 33 | 339 | IPR029058 | - | |
HCH8g0147 | 343 | PANTHER | ARYLACETAMIDE DEACETYLASE | 36 | 325 | IPR050466 | GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH4g0958 | HCH-Chr4:6160856 | HCH8g0147 | HCH-Chr8:5800192 | 9.10E-153 | dispersed | |
HCH5g1295 | HCH-Chr5:48716221 | HCH8g0147 | HCH-Chr8:5800192 | 3.50E-56 | dispersed | |
HCH8g0147 | HCH-Chr8:5800192 | HCH9g1192 | HCH-Chr9:18599700 | 2.30E-39 | dispersed | |
HCH8g0147 | HCH-Chr8:5800192 | HCH12g1616 | HCH-Chr12:43009664 | 5.90E-59 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH8g0147 | K14493 | - | csv:101213253 | 624.78 |