Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0147 ATGGCTGGAAGTAATGAAATCAATCTCAATGAGTCTAAGATGGTGGTTCCACTAAATACTTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGGCCCGATGGGACCTTCAATCGCCATTTGGCAGAGTTTCTTGACCGGAAAGTTCCAGCAAATGCTAACCCTGTTGATGGGGTTTTCTCGTTTGATGTCATTATTGATCGTGCTACTAGTCTCCTATGCAGAATCTATCGACCGGCCAATGGAAGTGAACCGCAGACTAATATTGTTGATCTTGAGAAGCCAGTGGGTTCTGGTGTTGTTCCTATTATAGTTTTCTTTCATGGTGGAAGCTTTGCACATTCATCTGCTAACAGTGCTATCTACGATACTCTATGTCGGCGATTGGTCAGCATTTGCAAGGCTGTTGTTGTCTCTGTGAACTACAGACGTGCACCTGAAAATAGGTATCCATGTGCTTATGATGATGGGTGGACCGCTCTTAAGTGGGTAAATTCAAGGTCATGGCTTCAAAGTAAAGACTCGAAGACCTATATTTATTTGGCTGGTGATAGTTCTGGTGGAAACATTGTACACAATGTTGCAACAAAAGCCGTGAAATCAGGAATTGAAGTATTGGGTAATATACTTCTCAATCCTATGTTTGGAGGACAGGAAAGAACTGAATCTGAGACTCGATTGGATGGGAAGTATTTTGTCACCGTCCGGGATAGAGACTGGTATTGGAGAGCTTTTCTCCCTGAAGGGGAAGACAGAGACCACCCAGCATGTAATCCCTTTGGCACCAGGGGTACAAGCCTTGAAGGGATCGACTTCCCCAAGAGCCTTGTTGTGGTGGCTGGTTTAGATCTCGTCCAGGACTGGCAATTGGCTTATGTCAAAGGGCTTGAGAAGGCTGGCCAAAAGGTGAAACTTTTGTACCTTGATCAGGCAACAATTGGCTTTTATTTGCTACCAAATAACGATCACTTCTATACCGTTATGGACGAGATAAGTGACTTTGTGAGTTCTGACTGTTAA 1032 43.8 MAGSNEINLNESKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIIDRATSLLCRIYRPANGSEPQTNIVDLEKPVGSGVVPIIVFFHGGSFAHSSANSAIYDTLCRRLVSICKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHNVATKAVKSGIEVLGNILLNPMFGGQERTESETRLDGKYFVTVRDRDWYWRAFLPEGEDRDHPACNPFGTRGTSLEGIDFPKSLVVVAGLDLVQDWQLAYVKGLEKAGQKVKLLYLDQATIGFYLLPNNDHFYTVMDEISDFVSSDC 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5800192 5801735 + evm.model.ptg000008l.1388 HCH8g0147 549245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0147 343 FunFam Gibberellin receptor GID1 1 341 - -
HCH8g0147 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 183 195 IPR033140 -
HCH8g0147 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
HCH8g0147 343 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
HCH8g0147 343 Pfam alpha/beta hydrolase fold 108 320 IPR013094 GO:0016787(InterPro)
HCH8g0147 343 SUPERFAMILY alpha/beta-Hydrolases 33 339 IPR029058 -
HCH8g0147 343 PANTHER ARYLACETAMIDE DEACETYLASE 36 325 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0958 HCH-Chr4:6160856 HCH8g0147 HCH-Chr8:5800192 9.10E-153 dispersed
HCH5g1295 HCH-Chr5:48716221 HCH8g0147 HCH-Chr8:5800192 3.50E-56 dispersed
HCH8g0147 HCH-Chr8:5800192 HCH9g1192 HCH-Chr9:18599700 2.30E-39 dispersed
HCH8g0147 HCH-Chr8:5800192 HCH12g1616 HCH-Chr12:43009664 5.90E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0147 K14493 - csv:101213253 624.78