Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0409 ATGTATTTTCTGACGTTCTTATTGATCTGTCAATGGGCATTTCAATATTTTTCACCAACTATAAGCAAAACTATCCTAGTCTTTACAATCAGTGTTTCCATTTTTGTCTTCTATTTTAAATATCATCGGAAAACTAATGCAGCTCTCCCACCGGGCCCAAGGCCGTGGCCACTTGTCGGCTGTCTCCCAACAATGTGGAGAAATAAGCCGATACACCAATGGATTCATTCAACAATGAAGCAATTTAATACTGAAATTGCTTGCATCCGTCTCGGAAATATCCACGTCATTCCAGTGACTTCACCGGAACTGGCCATGGAATTTCTCAAGACACATGATTCCATCTTTGCATCACGCCCCATCACGGTTACTGTCAAGATATTAACCGATGGATTTCTCACCACTGCCTTTTCACCATTGGGAGATCAATGGACGAAGATGAGAAGAATACTTGCTTCAAAAATTCTCAATCCATCCACACTTGTTTGGATGCTTCACAAAAGAACAGAAGAAGCTGACAATCTTCTACGTTACATTTTCAGCCGAACCAGTGCTGCTGAGAGCGGCGGTGCAGTGATCAATTTGAGAAGCATAACGCAACATTATTGTGGAAATGTTATTAGAAGAATGATATTTAATAGGAGATATTACAATGGAGAAGGGGAAGAAGGCGGGCCAGCCGTTGAAGACGAAGAGCATAACCAAGCACTGTTTACACTACTTCTCTATATTAATGGATTTTCTGTGTCAGATTACTTGCCTTATTTGAAAATATTTGATTTAGATGGACACCAGAAGATTGTAAAGAAGGCTTTGAAAATCATTTCAAAGTACAATGAGCCCATTATAAATGAGAGAGTTCAACAATGGAAAGATGGAAAGAGGGAGGAAGTTGAGGACATTCTCGATGTCCTTATCTCTCTCAAGGATGAAAATGAAAGACCATTGTTATCTCTTAAAGAAATTGGTGCACAGATTACGGAGCTACAACTTGAAACTATAGACAATCCTTCAAATGCAGTGGAATGGGCGATGGCGGAGTTAATCAATCAACCAAAGATTCTTGCAAAAGCAGTTGAAGAATTGGATAGAGTAGTTGGAAGAGAGAGGCTTGTTCAAGAATATGATATCCCTCAATTGAAATACCTCATGGCTATTGTTAGAGAATCATTCCGACTCCATCCACTTTCCCCGTTTAATGTTCCCCACGTCTCAACCTCTGACATTGTTGTTTCAGGTTACTTCATCCCAAAAGGAAGCCAGGTACTGTTAAGTCGTTTAGGTCTCGGTCGAAATCCAAGAGTTTGGGAGGACCCTTTGAAGTTTGATCCGGAGCGTCATCTCATTCCTGAGATGATGGAATTGGGATTGTCAGAACCAAACCTACGATTCATTACCTTCACCAGAGGGAGGAGAGGTTGCATAGGTAGCTCACTAGGGACTAATATTACAATGATGCTATTCGCCAGGATTCTGCAAGGATTTTCATGGAGTTTACCATACGGGACTAGAAACATAAGTTTCTCTGAGTCAGATGATCAATTCCTTCCAAAGCCATTGCACTTGTATGCGAAGACGCGCTTGCCTCATAATATGTATCCACGTTTTTAA 1611 40.72 MYFLTFLLICQWAFQYFSPTISKTILVFTISVSIFVFYFKYHRKTNAALPPGPRPWPLVGCLPTMWRNKPIHQWIHSTMKQFNTEIACIRLGNIHVIPVTSPELAMEFLKTHDSIFASRPITVTVKILTDGFLTTAFSPLGDQWTKMRRILASKILNPSTLVWMLHKRTEEADNLLRYIFSRTSAAESGGAVINLRSITQHYCGNVIRRMIFNRRYYNGEGEEGGPAVEDEEHNQALFTLLLYINGFSVSDYLPYLKIFDLDGHQKIVKKALKIISKYNEPIINERVQQWKDGKREEVEDILDVLISLKDENERPLLSLKEIGAQITELQLETIDNPSNAVEWAMAELINQPKILAKAVEELDRVVGRERLVQEYDIPQLKYLMAIVRESFRLHPLSPFNVPHVSTSDIVVSGYFIPKGSQVLLSRLGLGRNPRVWEDPLKFDPERHLIPEMMELGLSEPNLRFITFTRGRRGCIGSSLGTNITMMLFARILQGFSWSLPYGTRNISFSESDDQFLPKPLHLYAKTRLPHNMYPRF 536
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 37380492 37382496 + evm.model.ptg000008l.1126 HCH8g0409 549507
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0409 536 SUPERFAMILY Cytochrome P450 50 527 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 Gene3D Cytochrome P450 41 531 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 Pfam Cytochrome P450 50 516 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g0409 536 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 25 532 IPR051382 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g0405 HCH-Chr8:36359706 HCH8g0409 HCH-Chr8:37380492 1.70E-209 dispersed
HCH8g0406 HCH-Chr8:36610063 HCH8g0409 HCH-Chr8:37380492 2.60E-279 dispersed
HCH8g0407 HCH-Chr8:37063983 HCH8g0409 HCH-Chr8:37380492 3.20E-277 dispersed
HCH8g0409 HCH-Chr8:37380492 HCH6g0065 HCH-Chr6:729299 6.60E-73 dispersed
HCH8g0408 HCH-Chr8:37242837 HCH8g0409 HCH-Chr8:37380492 2.10E-273 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0409 - - - 0.0