Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0429 ATGATCTTTGGGGGAGTCTGGCTGTTTTTTTCTATGATGCTTGCAGCTTCAAGTGCTGCTGCTATGGATAAGCAGACCTACATAATTCACATAGATAACACCAAGATGGCGGCCTCGGGTCAAGCTGTGACCGACCCTGAACAATGGTACATGACGATGATTGATTTAGCTTCTGAATTATCATCTCAGGACAAAGGAGCCGCAGACACTGCTGAGATTCTTTATGTCTACAAAACTGCCATTTCAGGCTTTGCTGCTAAGCTTTCCACTAAAAAGCTTCACTCCTTGAGTAAAATGCCTGGCTTTCTTTCTGCCATTCCTGATGAAATGCTACAACTCCACACCACCCACTCCCCTCAGTTTCTTGGCCTACAAAGAGGCTATGGACTATGGGGTGCTACCAACTTGTCTTCTGATGTAATAATCGGTGTACTTGATACTGGCATATGGCCAGAACATGTAAGTTTCAATGATAAGGGCATGACCGCAGTGCCTGCGAAATGGAAAGGTGTTTGTGAGGAAGGCACAAAGTTCTCACGTTCAAATTGCAACAAAAAACTTATTGGTGCAAGAGCATTTATTAAAGGCTACGAGGCTATAGTTGGTCGAATGAACGATACAAAGGCCTTCCGATCTCCCCGGGACTCAGATGGGCATGGAACACACACTGCCTCAACTGCTGCTGGAAATATTGTGCACAATGCTAGCTTTTATGGCCTAGCCGAGGGAGCAGCCAGTGGAATAAGGTATACATCAAGAGTTGCAGCCTATAAAGTATGCTGGCCATTAGGCTGCGCAAATGCCGATATATTGGCAGCTATAGACCGTGCTGTTGATGATGGAGTGGATGTTTTGTCACTCTCTTTGGGAGGTGTTGCAAGGCCTTTTTATAGCGATGACATTGCCATAGCTGCATTTGGTGCAGTGAAACATGGCGTTTTTGTATCATGTTCTGCTGGTAATTCAGGCCCATCTCATTCGACAGTAGGTAATATAGCTCCATGGATCATGACGGTGGCTGCTAGCTACACTGATCGTACCTTCCCAACTATTGTAAAACTTGGAAATGGACAAGCTTTTGAAGGCTCTTCTTTGTATTCTGGGAAAAAAACCAATGAACTACCACTTGTTTATAACAAAACTGCAGGAAAGCAAGGAGCAGAGTTTTGCAGTAGTGGTTCACTAGTCCCAAAGCTGGTAAAGGGGAAGATTGTGGTATGTGAACGAGGAATAAATACAAGAACCGAGAAGGGAGAACAGGTGAAATTAGCAGGAGGAGCTGGGATGCTTTTAATTAACACAGAAGAGGAAGGTGAGGAACTTTTTGCTGACCCCCACATATTGCCAGCCACTTCTCTAGGAGCTTCAGCTGCCAAAGCCATCAAATCCTATTTGGGTACCTCAAGAAATCCAAAAGCTTCAATGACATTCGTTAAGACCAAGTATGGTAGCCAAGCACCAAAGGTTGCTGCGTTTTCTTCTAGAGGACCAAGTTCCTTTGGACCGGATGTCATCAAGCCAGATGTAACTGCACCAGGAGTTAATATCTTAGCTGCTTGGACACCCACAACCAGCCCAAGCTCGCTCAAGAGTGACAAAAGAAGAGTGTTATTCAATGTAATTTCAGGCACTTCAATGTCTTGTCCCCATGTAAGTGGTCTAGCTGCACTCCTCAAATCAGCACATAAAGATTGGTCACCTGCAGCCATCAAATCCGCCATGATGACCACAGCTTACATAAATGACAACAAAATGAAACCGATTTCCGACGTAGGCTCTACCGGTGTTCAACCAGCAAACCCTTTTGCATTTGGTTCGGGCCATGTCCATCCAGAAAGAGCTTCTGATCCAGGGCTAGTCTACGATATAACGTCGCGAGACTACCTAAACTACTTGTGTAGCTTGAATTACACTTCATCACAGATGTCTTTACTTTCAAGAGGGAATTTCACTTGTCCAACAAAAACATTTCTTCAGGCAGGCGACTTAAACTACCCTTCTTTTTCTGTGATTATGCAGAGGAAGAAGGCCAGAAATGTAACTGTTACATTAAAAAGAACAGTGACAAATGTTGGTAGTCCAAGGAGTAGTTACACTGTCCAAATGGATAATCCAAAAGGAGTAGCAGTTTTTGTGAAGCCTAAGATTTTAAATTTTGGGAAATTGGGAGAGAAGTTGAGTTACAAAGTGACTTTTAATGCACTGGGAAAAAGAGATGGCTTGGGCGAATTTAGTTTTGGATCTTTGGTCTGGCTTTCAGAGAAATATAGTGTAAGAAGTCCCATTGTAGTAACATGGGAAGGATAA 2307 43.65 MIFGGVWLFFSMMLAASSAAAMDKQTYIIHIDNTKMAASGQAVTDPEQWYMTMIDLASELSSQDKGAADTAEILYVYKTAISGFAAKLSTKKLHSLSKMPGFLSAIPDEMLQLHTTHSPQFLGLQRGYGLWGATNLSSDVIIGVLDTGIWPEHVSFNDKGMTAVPAKWKGVCEEGTKFSRSNCNKKLIGARAFIKGYEAIVGRMNDTKAFRSPRDSDGHGTHTASTAAGNIVHNASFYGLAEGAASGIRYTSRVAAYKVCWPLGCANADILAAIDRAVDDGVDVLSLSLGGVARPFYSDDIAIAAFGAVKHGVFVSCSAGNSGPSHSTVGNIAPWIMTVAASYTDRTFPTIVKLGNGQAFEGSSLYSGKKTNELPLVYNKTAGKQGAEFCSSGSLVPKLVKGKIVVCERGINTRTEKGEQVKLAGGAGMLLINTEEEGEELFADPHILPATSLGASAAKAIKSYLGTSRNPKASMTFVKTKYGSQAPKVAAFSSRGPSSFGPDVIKPDVTAPGVNILAAWTPTTSPSSLKSDKRRVLFNVISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSAMMTTAYINDNKMKPISDVGSTGVQPANPFAFGSGHVHPERASDPGLVYDITSRDYLNYLCSLNYTSSQMSLLSRGNFTCPTKTFLQAGDLNYPSFSVIMQRKKARNVTVTLKRTVTNVGSPRSSYTVQMDNPKGVAVFVKPKILNFGKLGEKLSYKVTFNALGKRDGLGEFSFGSLVWLSEKYSVRSPIVVTWEG 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38821542 38823848 + evm.model.ptg000008l.1106 HCH8g0429 549527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0429 768 Gene3D Peptidase S8/S53 domain 139 628 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH8g0429 768 Gene3D - 632 766 - -
HCH8g0429 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
HCH8g0429 768 ProSiteProfiles Serine proteases, subtilase domain profile. 121 615 - -
HCH8g0429 768 CDD Peptidases_S8_3 111 579 IPR034197 -
HCH8g0429 768 CDD PA_subtilisin_like 352 474 - -
HCH8g0429 768 Pfam Fibronectin type-III domain 662 764 IPR041469 -
HCH8g0429 768 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
HCH8g0429 768 FunFam subtilisin-like protease SBT1.5 345 482 - -
HCH8g0429 768 FunFam Subtilisin-like protease SBT1.5 632 767 - -
HCH8g0429 768 Gene3D - 345 482 - -
HCH8g0429 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 763 IPR045051 -
HCH8g0429 768 SUPERFAMILY Subtilisin-like 113 619 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH8g0429 768 FunFam Subtilisin-like protease SBT1.5 139 357 - -
HCH8g0429 768 Pfam Peptidase inhibitor I9 26 114 IPR010259 -
HCH8g0429 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 11 114 IPR037045 -
HCH8g0429 768 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
HCH8g0429 768 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
HCH8g0429 768 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
HCH8g0429 768 Pfam PA domain 374 461 IPR003137 -
HCH8g0429 768 Pfam Subtilase family 138 606 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH5g0445 HCH-Chr5:2992880 HCH8g0429 HCH-Chr8:38821542 4.40E-176 dispersed
HCH8g0429 HCH-Chr8:38821542 HCH8g0597 HCH-Chr8:42753632 7.20E-198 dispersed
HCH8g0429 HCH-Chr8:38821542 HCH11g1168 HCH-Chr11:43856094 1.10E-198 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0429 - - - 0.0