Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0463 ATGGAGAGCTGTATGATGGTTGATTATCCTTTGGGTGATAGTTCAGACATGGAAGTTGATGATATAAGATGTGATAACATTGCAGAGAAAGATGTTAGTGATGAGGAAATTGAAGCTGAGGATCTGGAGAGGCGTATGTGGAAGGACCGAATTAAACTTAAAAGGCTTAAGGAAAAGGAGAAGCTTGCTGCACAACAGGCTGCTGAAAAGCAAAAACCGAAGCAGACAACTGACCAGGCTCGGAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAGTATATGTTGAAACTGATGGAAGTGTGCAAAGCTCGTGGATTTGTGTATGGTATCATCCCTGAAAAGGGTAAACCAGTTAGTGGTGCTTCTGATAACATTAGAGCTTGGTGGAAAGAAAAGGTTAAATTTGATAAGAATGGACCAGCTGCCATAGCCAAGTATGAAGCAGATTGTCTTGCCAGTGGAGAGGCAGATGGAAATGGAAACGGGAATTCTCAGAGCATTCTCCAAGACCTGCAGGATGCGACTCTGGGGTCTCTTTTGTCTTCTTTGATGCAACACTGCGATCCCCCTCAACGCAAGTACCCTTTAGAAAAGGGGGTTCCTCCACCCTGGTGGCCCTCTGGAAATGAAGATTGGTGGATAAAACTTGGGCTATCCCATGGCCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAGGTTGGGGTTTTAACAGCCGTGATAAAACACATGTCACCTGATATTGCAAAGATAAGGAGGCATATACGCCAGTCTAAGTGTTTACAGGATAAGATGACAGCAAAGGAAAGTGCAATCTGGTTGGGAGTTTTAGGCCGAGAGGAATCTGTCATTCGACAACCTAGCAGTGATAATGGGACATCTGGAATAACAGAGACACGAAGAGGTCGCCGTGGTGAGAAGCAAGCTGCGGTAAGCACTGACAGCGACTATGATGTTGATCTGGCTGATGATGGTGTTGGCTCAGTTTCTTCTAAAGAGGACAGGAGAAATCAATTGATGGATGCGGAGCCATCCAGCAATCTGAACAGTAGTGCTCATCCTACTCAAGAGGAGCAGGGTGAAAAACATGGGAGAAAAAGACGTCGTGGCAGGTCAAAACTTGCTGATCAAGCACTGGTTCCATTTCAGAATGAACTATCCCAAATTGAACTGAGAAATACTCGTCTCGATATAAACCATTCCGATGTACCTTTAGTTGGATTTGAGATTCCAGGGAATCAGCAGCAAAAGGAGAATATCTCAGCTTTGAGGCCTCTGGACAAAGATCTGAATGTCCAATCAGAAGTACCAGCTCCCCTCTTCAACAATTTCTCCTCCATTCCTTCTGGCAATGTCAATATAATTTCCACCCAGAGCATGTATGTGGATGGAAGGCCTTTGCTGTACCCTGTAATGCAAAATACTGAGATGCAACATGAAAGTGCTTACAATATTTATAATCCATCAGTTGAGTATAGATCCAATCACGATGTGCAGAATTCTCAATATGTGGTTGATGAGCCTCATATGAGACTGGAGGATGGAGGCCATGTGCCAATACATCATAGAAACGATGAGAATATAGGACGGGAATTCAACTATGTTAAAGACACATTCAACGCCGAACAAGATAGACCTGTTGTCGATACACAGTTTGGATCACCAATCAACAGTTTGTCATTAGATTATGGAGCATTTAACAGTCCTTTCCATCTAGGAATTGATGGCGCAAGCTCATTCGATGACTTTTTGGTTGATGATGATTTAATCCAATACTTTGGAGCATAA 1806 43.36 MESCMMVDYPLGDSSDMEVDDIRCDNIAEKDVSDEEIEAEDLERRMWKDRIKLKRLKEKEKLAAQQAAEKQKPKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEADCLASGEADGNGNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWIKLGLSHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHIRQSKCLQDKMTAKESAIWLGVLGREESVIRQPSSDNGTSGITETRRGRRGEKQAAVSTDSDYDVDLADDGVGSVSSKEDRRNQLMDAEPSSNLNSSAHPTQEEQGEKHGRKRRRGRSKLADQALVPFQNELSQIELRNTRLDINHSDVPLVGFEIPGNQQQKENISALRPLDKDLNVQSEVPAPLFNNFSSIPSGNVNIISTQSMYVDGRPLLYPVMQNTEMQHESAYNIYNPSVEYRSNHDVQNSQYVVDEPHMRLEDGGHVPIHHRNDENIGREFNYVKDTFNAEQDRPVVDTQFGSPINSLSLDYGAFNSPFHLGIDGASSFDDFLVDDDLIQYFGA 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 40151339 40153144 - evm.model.ptg000008l.1072 HCH8g0463 549561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0463 601 MobiDBLite consensus disorder prediction 290 381 - -
HCH8g0463 601 FunFam Ethylene insensitive 3-like 1 74 152 - -
HCH8g0463 601 FunFam Ethylene insensitive 3-like 1 161 297 - -
HCH8g0463 601 Pfam Ethylene insensitive 3, DNA-binding domain 40 287 IPR047091 GO:0003700(InterPro)
HCH8g0463 601 MobiDBLite consensus disorder prediction 62 85 - -
HCH8g0463 601 Coils Coil 25 59 - -
HCH8g0463 601 MobiDBLite consensus disorder prediction 303 319 - -
HCH8g0463 601 Gene3D - 160 298 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
HCH8g0463 601 Gene3D - 74 150 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
HCH8g0463 601 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 564 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
HCH8g0463 601 MobiDBLite consensus disorder prediction 347 361 - -
HCH8g0463 601 SUPERFAMILY DNA-binding domain of EIN3-like 168 290 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g0463 HCH-Chr8:40151339 HCH8g0502 HCH-Chr8:41736719 3.00E-98 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34000 PF04873 EIN3 1.90E-127 No_clan HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0463 K14514 - csv:101210347 937.562