Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0485 ATGAGAACTGTAAAACGCGAACCCTCCACCCGTAATAATCGTACTAAAAACATCGCCGTCGATGCTGCTTCTATCAAACAGATTAAACGGGAACGAGTCGCAAAGGAGCGAGTTCTTTCCGGCGACCAAAATATGAATCCGGAAGAACCGCAAGATTTGACGAATAGACGAGTTCTCCGGTCTCGTTATCTCGCGGTGATTCATAAAATTAGTGAGAAAGGAGAGGATTTTTCCAAGGACTCGGATAAATTCAATATTATTATCAATGAGGTAGAGAAGTTGCACGAGCAAGTTCAGAAGCCCAGGGAGCAAGTTGCAGATGCTGAAGCTTTGCAAGATATTGCAAATTCCCTTGTGACGTCTATTCGATCGCAGTCGAACGAAGGAGTTACTCCCTCGGATTTTGTTAGTTGTTTGCTTAGAGAGTTTGGTGACATTAACAGTGCAATAACTGCTGAACAGAATGATCTGATTACTATCAGTTGGAAAAATATCGGACTTGGTGCTTCACCCATTTTCATGAAGGGTCATGGTTGCTGCACCATGCTTGGACCCATGAGCACTCAGTTGAAGCAACGAAAGACAATCATTTCCAGAAAACGTTCCCGGCCTACTGAAACTGATCGACCGGCAGAGGTTGAAGATGATGGATCTGAAGGAAAAAGTGATACAGACAAGAATATGGGCATTATGTTCACAATTTTAAGGAGAAATAAATGTGTTAGACTTGAAAACTTAATATTAAATAGAAAGTCTTTTGCACAGACAGTGGAGAATTTATTTGCTTTGTCCTTCCTGGTTAAGGATGGCCGGGCTGAAATTACTGTGGATCAGAATGGTTCTCATCTTGTGTCACCGAAGAATGCCCCTGCCCACAGTTCCGTTATGTCACATGAAGTTAATTACAGTCATTTCGTATTCAGATTTGATTTCAAGGATTGGAAGCAAATGATGAATGCGGAATCAGTGGGGGAGGAGCTGATGCCCCACAGAGGCTTTCTGAACTCAGCGCCAAGTCCTCGAGCAGAACCAGCATATGATTCTGAACCAGCAGCATTACCTACTACTCCAATTCGGAAGCTGTCAAGGAATCGTGGTTTGGTTATGCAATCTGTTGTTGAAGATTCTCCTGATAATGGCACTTCAGGAGCAACTCCAATCTTGAGGTGTAAGCGGAAGCTTAGCCAAGGATAG 1194 43.22 MRTVKREPSTRNNRTKNIAVDAASIKQIKRERVAKERVLSGDQNMNPEEPQDLTNRRVLRSRYLAVIHKISEKGEDFSKDSDKFNIIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFGDINSAITAEQNDLITISWKNIGLGASPIFMKGHGCCTMLGPMSTQLKQRKTIISRKRSRPTETDRPAEVEDDGSEGKSDTDKNMGIMFTILRRNKCVRLENLILNRKSFAQTVENLFALSFLVKDGRAEITVDQNGSHLVSPKNAPAHSSVMSHEVNYSHFVFRFDFKDWKQMMNAESVGEELMPHRGFLNSAPSPRAEPAYDSEPAALPTTPIRKLSRNRGLVMQSVVEDSPDNGTSGATPILRCKRKLSQG 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41106409 41108720 + evm.model.ptg000008l.1050 HCH8g0485 549583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0485 397 MobiDBLite consensus disorder prediction 191 224 - -
HCH8g0485 397 Pfam Nse4 C-terminal 241 328 IPR014854 -
HCH8g0485 397 MobiDBLite consensus disorder prediction 334 397 - -
HCH8g0485 397 PANTHER UNCHARACTERIZED 32 367 IPR027786 GO:0005634(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0006281(PANTHER)|GO:0030915(PANTHER)|GO:0030915(InterPro)
HCH8g0485 397 MobiDBLite consensus disorder prediction 199 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH2g0270 HCH-Chr2:40007940 HCH8g0485 HCH-Chr8:41106409 8.40E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0485 K22825 - csv:101220149 584.719