Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0501 ATGTCCACGATGGCGGAGGCGGTGGTGGTGGCGATAGCGATCGCGGCGGGAATGTTGCTGTGTGTAGCTGAGGGTAGAGAGCCTGTGCTGCATAGGGTTGGAGGAGGAAAATACAGTTGGGCTCCTAACATTAACTTCACTGAATGGGCATCTCATGAGCACTTTTATGTTGGTGATTGGCTCTATTTTGGGTTTGATAAGCAGATATACAATGTGTTGGAAGTGAACAAAACAAGCTATGAGAGTTGCAATGAGAAAGATTTCATAGAAAACATCACAAGGGGAGGAAGAGATGTTTTCAATCTAACAGAAGCAAAGCCATATTTCTTTCTTAGTGGCAGAGGTTTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGATGACTCCCCTCCCTTTTCTCCCAATATTTCATCTCCCACTTCCTCCCCCAAATTACTCACCAATCTTTCCCCACCTATAAAATCACCACTACCCCTTTTTCTACTCACCATTTCTTTGGCTTTTCTAGTGGATAATTTTATGTTTTTTTAG 534 42.51 MSTMAEAVVVAIAIAAGMLLCVAEGREPVLHRVGGGKYSWAPNINFTEWASHEHFYVGDWLYFGFDKQIYNVLEVNKTSYESCNEKDFIENITRGGRDVFNLTEAKPYFFLSGRGFCFQGMKVAVFVDDSPPFSPNISSPTSSPKLLTNLSPPIKSPLPLFLLTISLAFLVDNFMFF 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41711873 41712911 - evm.model.ptg000008l.1034 HCH8g0501 549599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0501 177 ProSiteProfiles Phytocyanin domain profile. 29 129 IPR003245 GO:0009055(InterPro)
HCH8g0501 177 Gene3D - 29 129 IPR008972 -
HCH8g0501 177 FunFam Lamin-like protein 27 130 - -
HCH8g0501 177 SUPERFAMILY Cupredoxins 30 127 IPR008972 -
HCH8g0501 177 Pfam Plastocyanin-like domain 40 121 IPR003245 GO:0009055(InterPro)
HCH8g0501 177 PANTHER BLUE COPPER PROTEIN 18 132 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0296 HCH-Chr6:4351120 HCH8g0501 HCH-Chr8:41711873 1.00E-19 dispersed
HCH8g0501 HCH-Chr8:41711873 HCH9g0265 HCH-Chr9:1652830 8.30E-41 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0501 - - - 0.0