Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0569 ATGGGAAGAGAAGTTCAAAAGCAGCCACAGCAGGAGATCGCGTCGGCGGTGGAGCAGCTGGTGGCCGTTAATCCGTACAATCCTGACATTCTTCCCGATCTCGAAAACTACGTAAACGAGCAGGTCTCTTCAGAAACTTACAGTTTAGACGCTAATCTTTGCCTTCTTCGCCTCTATCAGTTTGATCCCGAGAGAATGAGTACTCAAATAGTGGCTCGCATCTTGGTTAAGGCTCTGATGGCAATGCCAGCTCCGGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAAAGAGTGCAAATGGAGGATCAATTCAAGACTTTAATTATACTTTCCCATTATTTGGAGACGGGGAAGTTCCGTCAATTCTGGGATGAAGCTGCTAAGAATCGTCATATAGTTGAGGCTGTGCCAGGTTTTGAACAAGCAATACGAGCTTATGCAGTTCATGTGCTTTCTTTGACTTATCAGAAGGTTCCTAGATCAGTGCTTGCCGAGGCCATCAATATTGAGGGGCTATCTTTGGACAAATTTCTTGAGCATCAAGTTGCAAGCTCTGGTTGGTTTCTTGAGAAAGGTCAGGGGAAGGGCCAACTTATTGTTATTCCGCCCAATGAATTCAATCATCCTGAATTGAAGAAGAAATCCGCAGACAGCATTCCCTTGGAACATATAACTCGCATCTTTCCGATTCTTGGCTAA 699 44.49 MGREVQKQPQQEIASAVEQLVAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFDPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIRAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVASSGWFLEKGQGKGQLIVIPPNEFNHPELKKKSADSIPLEHITRIFPILG 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 42499376 42503850 - evm.model.ptg000008l.966 HCH8g0569 549667
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0569 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
HCH8g0569 232 SUPERFAMILY Winged helix DNA-binding domain 137 229 IPR036390 -
HCH8g0569 232 FunFam Eukaryotic translation initiation factor 3 subunit K 8 125 - -
HCH8g0569 232 Pfam CSN8/PSMD8/EIF3K family 67 192 IPR033464 -
HCH8g0569 232 Gene3D - 128 230 IPR036388 -
HCH8g0569 232 Gene3D ARM repeat; domain 1 5 125 IPR016020 GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006446(InterPro)|GO:0043022(InterPro)
HCH8g0569 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 11 229 IPR009374 GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)
HCH8g0569 232 FunFam Eukaryotic translation initiation factor 3 subunit K 128 231 - -
HCH8g0569 232 SUPERFAMILY ARM repeat 9 135 IPR016024 -
HCH8g0569 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0569 K15028 - csv:101214255 442.195