Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0658 ATGAAATTACGATCTTCTTCGATTCTCATATCACTCCTCTTCTTCTCTACTTTCTCTTTCCTTTCTCTCTCTCTCGTAACCGTCACTGATTCCGACTTTCTCGCTGAAGACAACCAGATCAATGCTACATCAATCTCCAACTCTTCGAGATCCACCAGCGATGATAATAGTTTCGCTAACATAATCGATCGCGCTCTCGAAAGAGAATTCACTGAGAATGAGCAGACTAATGAAGTTCCGGATGCTGGCAGTTTCAATAACAGTGTTGCTGAGCAGCAGGCAGTTTTGGAAACTGTTGCCAGAGTTAAGTCGAAGAAGAATGAAACTAAAACAAAGGAGGAGAAATCATTTCAGTTCCATGATGTCTTCAATTTAGATAATGAGAATCGAGCTGAAGATATGCCCACGTTAATTGACCGGAAGGACAATGTCTTTATTATATCCAATCCAAAATCGAAGTATCCGGTTCTCCAATTGGATTTAAGATTGATTTCAGATCTAGTGGTTGTTATTGTATCCGCTACTTGTGGTGGCATTGCTTTTGCTTGTGCAGGACAACCGGTCATTACTGGATATTTGTTGGCTGGATCTCTCATTGGACCGGGAGGTTTGAGTTTCGTTAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTGATCTTCCTTCTTTTTGCTCTGGGCTTGGAGTTCTCCACTACAAAACTTCGTGTTGTTCGAGCGGTGGCTATTCTTGGAGGACTGCTCCAGATTTTCCTGTTTATGTGCTTGTGTGGAATAATAGCTTCATTATGTGGTGGCAAATCTTCAGAGGGGGTATTTGTTGGTGCTTTCCTGTCCATGTCTTCAACTGCAGTGGTCTTGAAATTTTTGATGGAAAGAAATAGCGTCAATGCCCTTCATGGTCAGGTGACCATTGGTACCCTTATTCTTCAGGACTGTGCTGTAGGTTTGCTGTTTGCCCTGCTTCCAATTCTCGGTGGTACTTCTGGTGTTCTCCAGGGGGTTTTGTCCATGACTAAATCGTTGGTGATCTTGATAACATTTTTGATTATTTTGTCAATTTTATCTCGCACATGTGTTCCATGGTTTCTTAAGCTTATGATTAGCCTGTCATCTCAGACTAATGAACTTTATCAATTAGCAGCTGTGGCATTCTGCTTACTTGTAGCTTGGTGCAGTGATAAGCTAGGCCTAAGCCTTGAATTGGGTTCCTTTGCTGCGGGAGTGATGATATCAACTACGGATCTTGCTCAGCACACACTTGAACAGGTTGAGCCTATCCGCAACTTCTTTGCTGCACTTTTTCTTGCCAGCATTGGGATGTTAATTCATGTCCATTTCCTATGGATTCACATTGATATTTTACTTGCGGCTGTTTTATTGGTCATCGTCGTAAAAACTATAGTGATTGCTACTGTGGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGAATGTCACTAGCGCAAATTGGAGAATTTGCTTTTGTCCTTTTAAGCCGTGCTTCTAATCTTCATCTTGTCGAGGGAAAATTGTACATTCTGCTGCTTGGCACTACCGCACTTAGTTTGGTGACCACACCCTTACTTTTCAAGCTGATTCCTGCTGTGGTACGTATTGGAGTGCTATTGCGGTGGTTTTCTACTGATGGTCTAACTGAGATGGGATTTAAAGGAGAGAGCTTTCGAACGGATAGTGGAAAGCGCATTCCGTTGGTGGTTCAAGACTCTCACTTTTCATGA 1758 42.38 MKLRSSSILISLLFFSTFSFLSLSLVTVTDSDFLAEDNQINATSISNSSRSTSDDNSFANIIDRALEREFTENEQTNEVPDAGSFNNSVAEQQAVLETVARVKSKKNETKTKEEKSFQFHDVFNLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVITGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGIIASLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVILITFLIILSILSRTCVPWFLKLMISLSSQTNELYQLAAVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWIHIDILLAAVLLVIVVKTIVIATVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSTDGLTEMGFKGESFRTDSGKRIPLVVQDSHFS 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43354604 43364722 + evm.model.ptg000008l.877 HCH8g0658 549756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0658 585 Gene3D - 161 544 IPR038770 -
HCH8g0658 585 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 32 566 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
HCH8g0658 585 Pfam Sodium/hydrogen exchanger family 171 537 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1158 HCH-Chr11:43800999 HCH8g0658 HCH-Chr8:43354604 1.60E-189 dispersed
HCH7g1608 HCH-Chr7:48322025 HCH8g0658 HCH-Chr8:43354604 7.70E-35 dispersed
HCH4g0540 HCH-Chr4:3508392 HCH8g0658 HCH-Chr8:43354604 4.60E-245 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0658 K26735 - csv:101208614 929.472