Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0661 ATGGAGAAGAGTTATTTTGATGGGGCTGGGAAAGTGGTGGTGGTCGCCATTAAAGCAGCTTCCAAGGATGTTTCAAAGACTGCTTTGGTTTGGGCTTTGACTCATGTTGTTCAGCCTGGAGATTATATTAAGCTTCTTGTGGTGATTCCTTCTCACCCCACAAGTAAATGGATTCGAGAATTTTCCAGATTGACCAGTGACTGTGCCATTGGTGCTTGGAGAACTCCATCAGGAACCCTTTCAGATCAGAAGAATGATATTGCTCATTCATGTTCTCAAATGGTACATCAACTTCGTGGTGCTTATGATCCACTTAAGATAAAAGTCAGGATTAAAGTTCTTTCTGGTTTGGTTCGGGGTATGGTGGCTACTGAAGCTAAGAGAGCTCAATCTAACTGGGTGATATTGGATAAGCATTTGAAAGATGAAAGGAAATACTGCTTGGAAGAGCTGCAATGCAATGTTGTCGTTATGAATAAATCTCAGCCAAAGGTTCTTCGTTTGAATTTAATGAATTCCCCTAAAATGGAGCCTAGAGAGGCTTGGATACCACCACATGAATTAGAAGTTTCTCAGAGGTGTCTAAAAAGCTATTTTGATGAATCAACCACCATGTATAGGGGTCCAGCCTTGACTCCTTCGAGTAGTCCTGATGTGGAGTCACCTCTAACCGTAACTGATGTTGGAACATCATCAATATCAAGCTCGGATATGGGTAGCTCATCTTTGCACTCTGGAATCTGTGGCAACCTCAGAAATGAATCCGGAGCTGCAGCTGAAGGAACTAGAATTTTCTCTGAATCTGATTCAGATAGTGAAAAGCAAACGCCCTCAGTTTCATATTTTCAGCGTTGCTTGGTTGATATTCTAAGTTCAAGGCGTAAATTCCATCCAAATGTGATGGAAGAATCACGAAATGCTCAGGGTAAACCTCCGGCTTCCACACGCCAAGGTCAAGGTTTGGTCAAGAAATTGTCAACTTTATCTCTAGAACCTGATATTGATGTGGTGAATCGTAGCAGAAGCGTAAGGAACACAATTTCATTTACTAGGAAAGCACCTCTAGGTCCTCCTCCATTGTGTTCTATGTGTCAGCACAAGGCACCTGCATTTGGGAACCCACCAAAATGGTTCACTTATGCTGAACTTGAAGTTGGTACCAGTGGATTTGCACGAACAAATTTTTTGGCTGAGGGTGGATTTGGGTCTGTGCACCGAGGTGTCTTACCAGATGGACAAGTCATTGCTGTCAAGCAATATAAACTAGCTAGTTCCCAAGGTGATCGAGAATTTTGTTCAGAGGTCGAGGTGTTAAGTTGTGCACAGCATCGTAATGTTGTGCTGCTAATTGGATTCTGTGTAGAGGGTGGAAGAAGGTTGCTTGTTTATGAATACATTTGCAATGGATCTCTTGATTCTCATCTTTATGGAAAAAATCACGATCCACTGAAATGGTCTGCACGACAGAAGATAGCAGTTGGAGCTGCACGGGGTTTGAGATACCTTCATGAAGAATGTAGAGTAGGCTGCATTGTGCATCGTGACATCCGGCCTAACAATATCCTCCTTACTCATGATTTTGAACCACTAGTTGGAGATTTTGGGCTAGCGAGGTGGCAGCCAGATGGAGACTTAGGGGTGGAGACCAGGATCCTTGGGAGATTTGGCTACTTGGCTCCAGAGTATGCACAGAGTGGCCACATCACAGAAAAAGCAGACACTTACTCCTTTGGTGTAGTCTTGCTGGAACTCGTGACTGGACGCAAAGCTATTGATTTAAATCGTCCCAAGGGCCAGCAGTGCCTCACTGAATGGGCACGGAACCTTCTGCGGAAAGATGCAATTTCTGAACTAGTTGATCCCTGCTTGAGGAACTGTTATTCAGACGAGGAGGTTCACCGAATGCTGCAATGTGCTTCCTTGTGCATCCAGCATGACCCATGTTTAAGGCCGCGCATGTCTCAGGTTCTCCGAGTGCTGGAAGGTGATATCATTCTTTAA 2001 44.13 MEKSYFDGAGKVVVVAIKAASKDVSKTALVWALTHVVQPGDYIKLLVVIPSHPTSKWIREFSRLTSDCAIGAWRTPSGTLSDQKNDIAHSCSQMVHQLRGAYDPLKIKVRIKVLSGLVRGMVATEAKRAQSNWVILDKHLKDERKYCLEELQCNVVVMNKSQPKVLRLNLMNSPKMEPREAWIPPHELEVSQRCLKSYFDESTTMYRGPALTPSSSPDVESPLTVTDVGTSSISSSDMGSSSLHSGICGNLRNESGAAAEGTRIFSESDSDSEKQTPSVSYFQRCLVDILSSRRKFHPNVMEESRNAQGKPPASTRQGQGLVKKLSTLSLEPDIDVVNRSRSVRNTISFTRKAPLGPPPLCSMCQHKAPAFGNPPKWFTYAELEVGTSGFARTNFLAEGGFGSVHRGVLPDGQVIAVKQYKLASSQGDREFCSEVEVLSCAQHRNVVLLIGFCVEGGRRLLVYEYICNGSLDSHLYGKNHDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLGVETRILGRFGYLAPEYAQSGHITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWARNLLRKDAISELVDPCLRNCYSDEEVHRMLQCASLCIQHDPCLRPRMSQVLRVLEGDIIL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43383304 43387307 - evm.model.ptg000008l.874 HCH8g0661 549759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0661 666 ProSiteProfiles Protein kinase domain profile. 390 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0661 666 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 362 465 - -
HCH8g0661 666 SUPERFAMILY Protein kinase-like (PK-like) 373 658 IPR011009 -
HCH8g0661 666 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 466 666 - -
HCH8g0661 666 Pfam Protein tyrosine and serine/threonine kinase 394 659 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0661 666 ProSitePatterns Tyrosine protein kinases specific active-site signature. 511 523 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0661 666 Gene3D Phosphorylase Kinase; domain 1 361 465 - -
HCH8g0661 666 SMART tyrkin_6 390 660 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
HCH8g0661 666 CDD STKc_IRAK 396 662 - -
HCH8g0661 666 MobiDBLite consensus disorder prediction 209 239 - -
HCH8g0661 666 Gene3D Transferase(Phosphotransferase) domain 1 466 664 - -
HCH8g0661 666 PANTHER OS01G0750732 PROTEIN 198 661 IPR050885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0233 HCH-Chr12:1294852 HCH8g0661 HCH-Chr8:43383304 9.50E-139 dispersed
HCH8g0661 HCH-Chr8:43383304 HCH8g0750 HCH-Chr8:44129632 5.10E-83 dispersed
HCH6g0117 HCH-Chr6:1465601 HCH8g0661 HCH-Chr8:43383304 9.10E-222 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81697 PF07714 PK_Tyr_Ser-Thr 3.00E-40 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0661 - - - 0.0