Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0699 ATGAAGAAAACTCCTTCTTTTCTTCCTCTTCTCTTCTTCTTCATCATCAAAGTAATCAAATCCCAAAAACTCTATGAACAAGAACACAATATTCTCCTTGAACTAAACAAATTCTGGCAAAACCCACCTCCACTTTCTCACTGGTCTTCCTCCAACACTTCTCATTGTTCATGGCAAGAAATAACATGCACTCAAAACTCCATCACTTCTCTCAAATTCATCAACTACAACATCACTGGAGCTTTCCCGCCTTTCATTTGCCTTCTCAAGAATCTCACACTCCTTGACTTTCAATTCAATTACATTTCCAGCACTTTTCCAACTTCTCTTTATGATTGTTCAAGACTTAATTATCTTGATCTCTCTCAAAACTACTTTGTTGGGCCCATTCCAAATGATATCCATCGTTTATCCCATCTCCAGTTTCTTAGCCTTGGAGCTAACAACTTCTCCGGCGACATTCCCCCGAGTATCGGTCGGTTGTCGGGGCTTCGCTTTCTTCATCTCTATAAAAACCAGTTCAATGGGACTTACCCTTTTGAAATTGGTAACTTGCTTAATTTGGAAGAATTGCAAATGCCTTATAATAGGAAACTGATGCCTGCTAAGATTCCTTCAAGTTTTACTCAATTGAAGAAGTTGAAGTTTCTATGGATGGCTGATTCAAATGTGATTGGAGAAATCCCAGAACTGATTGGAAATATGGAAGCTCTTGTGAATTTGGATTTGTCAATGAATAGAATTAATGGGACGATTCCTGATGGGTTGTTTACTTTAAAGAATTTAACTGTGTTGTATTTGTACAAGAATAATCTGACAGGGGAGATTCCTCAGAGGATAGAATCTACGAACTTGTCGGAATTCGATGTTTCCGAGAACGATTTGGTTGGGAGAATTCCAGAGGATATAGGTAACCTGCACCAATTAACAGCTCTCCTTTTGTTTTCTAATAAGTTATCAGGAGAAATCCCAGAAAGAATTGGTTTGCTTCCATTATTATCAGATATCAGATTGTTTAGTAATAGATTGACAGGAACTCTGCCACCGGATTTCGGTCGATTTTCGGTTATCGTAGGTTTTCAGGTGAATTCCAATATGCTAACTGGAAAATTGCCTGAAAATTTATGTTCTGGAGGGAAGCTAATGGGATTGACAGCTTTTGAAAATAGTCTTAGCGGGGAATTACCAGAATCATTGGGGAAGTGTGATAGTTTGGTAATCCTTGATATTCATAGTAATAACTTTTCTGGGAAAATTCCAAGTGGTTTATGGAACTTGTTGAATTTGAAGTTTGTTATGATGAGTGATAATTCTTTTACTGGTGAGCTTCCTGAGAAAGTTTCGATGAATCTTTCCAGATTGGAGATTAGTAATAACAAATTTTCAGGGAGAATTCCTTCTGAGGTATCTTCATGGAGGCAATTGGTGATTTTTGAAGCAAGTAATAACTTGTTTTCAGGGTCAATTCCTCAAGAGTTGACTGCTCTTCCTTCTTTGATGAAGCTTTCACTCGATGGAAACCGATTTTCGGATGATCTTCCTTCGAATATTATTTCATGGAATTCATTGACTGCTCTTAATTTAAGTGGAAACCATCTTTCTGGGAAGATTCCTGAGGAAATTGGTGATTTGCAAAGTCTTACTGATTTAGACTTATCAAATAATCAACTTTCTGGAGTGATTCCTCATGAACTTGGGAATCTGAAGCTGAATTTCCTCAATCTTTCTTCAAATTATCTGTCTGGGAAAATCCCAGTTGGATTTGATAATGCAGTTTATGAAAGAAGTTTCTTGAATAACCCAGGTCTTTGTGCAAATAATGCAAATCTAAATCTCAATGTCTGCGATTATAGACCCGAAAATTCGAGCAAAATTTCTTCTCATCATCTTGCTCTGATTGTAAGCTTGAGCATAATAGTATTCATACTTGCTGTGGTATCTTCTCTCTTTGTAATCAGAATTTACAGGAAGAGAAATAACAGAGTAGATCTTGAATGGAAGTTGATCTCATTCCAGAGGCTGAATTTTTCGGAGACGAAACTCTTATCTGGACTAACGGAAAACAACTTGATCGGTAGCGGTGGATCGGGGAAAGTTTACCGCATCCCGGTGACGAGTTTCGGCGACAACGTGGCCGTGAAAAGGATATGGAGCAGCAGGAAGTCAGAGGAGAAGCTCGAGAAAGAATTCATGGCGGAAGTCGAGACTCTAAGTTCAATTCGACATAAGAACATAATCAAACTGCTCTGTTGTGTCTCTTGTAAAACTTCAAAGCTTCTTGTCTATGAGTACATGGAGAATCAAAGCCTTGACAAATGGTTGCATAAGAAAAACAAACCAAAGTCGCGAGCGGATTCTATTCAACTTCCTGATCATGTCGCTGCCCTCGACTGGCCGAAAAGATTTCAAATTGTGATCGGGGCAGCGCAGGGCCTATCCTATATGCATCATGAATCCTCGCCACCGGTGATTCATCGAGACTTGAAGACGAGCAATATCTTACTTGATTCAGAATTCAATGCAAAAATTGCAGATTTTGGTTTAGCAAAATTGTTGCTCAAGGAAGGAGAACCTGCTTTAGTCTCAGCAGTTGCTGGTTCCTTTGGATACATAGCTCCAGAATATGCTCAAACACCAAGAATAAATGAGAAAATAGATGTATTTAGTTTTGGGGTTATTCTTCTGGAGCTGGCAACTGGAAGAGAAGCCATTGATGGTGATGGAAACAAATCTCTTGTCGAGTGGGCTTGGGATCACATTCAAGAAGGAAAACCAATAACTGATGCTTTGGATGAGGAGATAAAGAAGCCCTGTTATTTAGATCAAATGTCTAGTGTTTTTAAGCTTGGTATCATTTGCACTTCTACTTTGCCCTCTAACAGACCAACCATGAACCAGGCTCTGCAAATCTTGATCCGCTGCAGTAGCTCGGTGGTCGACAACCACAACAACAAGAAGGGTGGCGAGTTGAGTAGCACTCCATTGCTCAATAATTCAAAGCATGGAGGAAAGTTAGGAGACGACGACAACGACAACGATGCCGATTTCAAATCCATTGTGTGA 3063 39.28 MKKTPSFLPLLFFFIIKVIKSQKLYEQEHNILLELNKFWQNPPPLSHWSSSNTSHCSWQEITCTQNSITSLKFINYNITGAFPPFICLLKNLTLLDFQFNYISSTFPTSLYDCSRLNYLDLSQNYFVGPIPNDIHRLSHLQFLSLGANNFSGDIPPSIGRLSGLRFLHLYKNQFNGTYPFEIGNLLNLEELQMPYNRKLMPAKIPSSFTQLKKLKFLWMADSNVIGEIPELIGNMEALVNLDLSMNRINGTIPDGLFTLKNLTVLYLYKNNLTGEIPQRIESTNLSEFDVSENDLVGRIPEDIGNLHQLTALLLFSNKLSGEIPERIGLLPLLSDIRLFSNRLTGTLPPDFGRFSVIVGFQVNSNMLTGKLPENLCSGGKLMGLTAFENSLSGELPESLGKCDSLVILDIHSNNFSGKIPSGLWNLLNLKFVMMSDNSFTGELPEKVSMNLSRLEISNNKFSGRIPSEVSSWRQLVIFEASNNLFSGSIPQELTALPSLMKLSLDGNRFSDDLPSNIISWNSLTALNLSGNHLSGKIPEEIGDLQSLTDLDLSNNQLSGVIPHELGNLKLNFLNLSSNYLSGKIPVGFDNAVYERSFLNNPGLCANNANLNLNVCDYRPENSSKISSHHLALIVSLSIIVFILAVVSSLFVIRIYRKRNNRVDLEWKLISFQRLNFSETKLLSGLTENNLIGSGGSGKVYRIPVTSFGDNVAVKRIWSSRKSEEKLEKEFMAEVETLSSIRHKNIIKLLCCVSCKTSKLLVYEYMENQSLDKWLHKKNKPKSRADSIQLPDHVAALDWPKRFQIVIGAAQGLSYMHHESSPPVIHRDLKTSNILLDSEFNAKIADFGLAKLLLKEGEPALVSAVAGSFGYIAPEYAQTPRINEKIDVFSFGVILLELATGREAIDGDGNKSLVEWAWDHIQEGKPITDALDEEIKKPCYLDQMSSVFKLGIICTSTLPSNRPTMNQALQILIRCSSSVVDNHNNKKGGELSSTPLLNNSKHGGKLGDDDNDNDADFKSIV 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43721223 43724369 - evm.model.ptg000008l.836 HCH8g0699 549797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0699 1020 SUPERFAMILY Protein kinase-like (PK-like) 682 975 IPR011009 -
HCH8g0699 1020 Pfam Protein kinase domain 687 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0699 1020 CDD STKc_IRAK 691 973 - -
HCH8g0699 1020 Gene3D Ribonuclease Inhibitor 200 325 IPR032675 -
HCH8g0699 1020 SMART LRR_typ_2 496 520 IPR003591 -
HCH8g0699 1020 SMART LRR_typ_2 544 568 IPR003591 -
HCH8g0699 1020 SMART LRR_typ_2 306 330 IPR003591 -
HCH8g0699 1020 SMART LRR_typ_2 137 161 IPR003591 -
HCH8g0699 1020 SMART LRR_typ_2 89 113 IPR003591 -
HCH8g0699 1020 SMART LRR_typ_2 235 259 IPR003591 -
HCH8g0699 1020 PRINTS Leucine-rich repeat signature 544 557 - -
HCH8g0699 1020 PRINTS Leucine-rich repeat signature 238 251 - -
HCH8g0699 1020 FunFam Kinase family with leucine-rich repeat domain-containing protein 765 987 - -
HCH8g0699 1020 Gene3D Ribonuclease Inhibitor 25 199 IPR032675 -
HCH8g0699 1020 Gene3D Ribonuclease Inhibitor 329 614 IPR032675 -
HCH8g0699 1020 MobiDBLite consensus disorder prediction 983 1020 - -
HCH8g0699 1020 FunFam Leucine-rich repeat receptor-like protein kinase TDR 303 617 - -
HCH8g0699 1020 SUPERFAMILY L domain-like 34 372 - -
HCH8g0699 1020 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 181 281 - -
HCH8g0699 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0699 1020 FunFam Receptor-like protein kinase HSL1 665 764 - -
HCH8g0699 1020 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
HCH8g0699 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 973 IPR050647 -
HCH8g0699 1020 Gene3D Phosphorylase Kinase; domain 1 668 764 - -
HCH8g0699 1020 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515(InterPro)
HCH8g0699 1020 Pfam Leucine Rich Repeat 404 426 IPR001611 GO:0005515(InterPro)
HCH8g0699 1020 Pfam Leucine Rich Repeat 450 471 IPR001611 GO:0005515(InterPro)
HCH8g0699 1020 Pfam Leucine Rich Repeat 238 258 IPR001611 GO:0005515(InterPro)
HCH8g0699 1020 Pfam Leucine Rich Repeat 261 280 IPR001611 GO:0005515(InterPro)
HCH8g0699 1020 SMART serkin_6 685 978 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0699 1020 MobiDBLite consensus disorder prediction 1002 1020 - -
HCH8g0699 1020 ProSiteProfiles Protein kinase domain profile. 685 979 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0699 1020 Pfam Leucine rich repeat 522 580 IPR001611 GO:0005515(InterPro)
HCH8g0699 1020 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515(InterPro)
HCH8g0699 1020 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524(InterPro)
HCH8g0699 1020 FunFam Receptor-like protein kinase HSL1 isoform A 25 176 - -
HCH8g0699 1020 SUPERFAMILY RNI-like 283 630 - -
HCH8g0699 1020 MobiDBLite consensus disorder prediction 983 999 - -
HCH8g0699 1020 Gene3D Transferase(Phosphotransferase) domain 1 765 991 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0313 HCH-Chr4:2041356 HCH8g0699 HCH-Chr8:43721223 6.20E-125 dispersed
HCH7g0287 HCH-Chr7:2022882 HCH8g0699 HCH-Chr8:43721223 4.50E-80 dispersed
HCH8g0699 HCH-Chr8:43721223 HCH6g1442 HCH-Chr6:48158414 4.50E-54 dispersed
HCH8g0699 HCH-Chr8:43721223 HCH8g0700 HCH-Chr8:43733049 3.00E-111 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81699 PF00069 Pkinase 5.20E-47 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0699 - - - 0.0