Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH8g0750 | ATGTCGTCTCCGGCCCCTACTTCGCCGCCGGCTACCAACACTACCTCTCCCCCACCGCCCACTCCCGATGCACCACCCCCATCGACACCGTTGCCTCCGCCACCCTCTACCACTCCTTCGCCGCCTCCACCGGATATTTCCACTCCTTCGCCGCCGCCGCCGGATATTTCCACGCCTTCGCCGCCTCCACCTGACAGTTCCACTCCTTCTTCACCGTCAACCCCTTCAATCTCTCCTCCTCCTCCGTCGTCTACCACCACGCCATCTCCTCCACAGCTAACACCTTCTAATCCTGGTTCACCGGCAAACCCCGGAGGAATTCAGCCACCTCCACCCCCGCCGTTGTCACCGTCGCAGTCAGTTTCATCAGGACTCGTGGCTGGGATGACAATTGCTGGGGTTGTAGTGATTGTGGTTGCTTTGATCATTACTTGGTTTTGCGTTAAAAAGAAGAAGAGACGTGACGTGGAATCTCACTATCCGCCACCGCCGGCGCCACCGCTGGCTTTTAAAGATGGAGCTTATAATCAGCAGCAGCAGCAGCAGCATTACTGGCAATCAAATCCTCCTCCCCCGGCAAATCATGTCGTTGGGGCGGTACCGAAGCCGAAGCCGTCTCCTCCACCAGCATCACGGCCGCCTCTTTCACCTCCTGTTATAAGCAGTAGTGGAGGATCTGGCTCTAATTACTCAGGGTCTGAAAATTCATTGGCTACGGCCCCATCTGGGATTTCTTTAGGTTTCTCACAAAGTACTTTTACCTATGAAGAATTAGCCATGGCTACTGATGGATTCTCTGATGCTAATCTGCTTGGACAAGGGGGATTCGGATATGTTCATAGAGGGGTTTTTCCTAATGGAAAGGAAGTGGCTGTGAAGCAACTTAAGGCCGGAAGCGGTCAAGGAGAGCGTGAGTTTCAAGCTGAAGTCGAGATAATTAGCAGAGTTCATCACAGACATCTTGTTTCTTTGGTGGGATATTGCATCACTGGTTCACAAAGATTGCTTGTTTATGAATTTGTTCCTAATAACACTTTGGAGTTCCATTTGCATGGGAAAGGAAAACTCACTATGGATTGGTCAACAAGACTGAAAATTGCATTAGGGTCTGCAAAGGGGTTGGCTTACCTTCATGAGGACTGTAATCCTAAGATTATTCATCGTGATATAAAAGCAGCGAATATTCTATTGGATCTCAAATTTGAAGCGAAGGTTGCAGACTTCGGACTTGCAAAGTTATCTTCTGATGTTAATACCCATGTTTCAACCCGAGTGATGGGCACTTTCGGATATCTTGCTCCTGAATACGCTGCCAGTGGAAAACTTACCGAGAAATCGGATGTCTACTCCTACGGGGTGATGCTTTTGGAGTTGATTACTGGACGCAGGCCTGTCGATGCAACTCAGTCCTTCATGGAGGATGGATTGCTAGATTGGGCAAGGCCTCTACTCCTTAAAGCCACAGAAGAGGGAATCTATGACGGTCTCGTAGATCCAAAGTTGCATGATAACTACAATCACAATGAGATGGCTCGCATGGTTGCTTGTGCTGCCGCTTGTGTACGTCATTCGGCAAGGCGTCGACCACGGATGAGCCAGGTCGTTCGTGCTCTGGAAGGTGACTCATCTCTTTCTGATCTTAATGAAGGAACCAGGCCTGGACACAGCACCGCCTACAATTCTTATGGAAGCTCTGATTACGACACTGCACAATACAACGAGGACCTGAAAAAATTCAGGAAGATGGCATTGGCAAGCCAGGAGTATGGCGCCGGTAGCGAGTATAGCGAGCCAACAAGTGAGTATGGTTTGTATCCATCCGCCTCAAGCGGCAACGTTCAAACCACCCAAGAAACGGGGACGACAACACTGAAAAGAGAAAGTGAAGGTTTTAGCAGAAGCTCTTGA | 1908 | 49.9 | MSSPAPTSPPATNTTSPPPPTPDAPPPSTPLPPPPSTTPSPPPPDISTPSPPPPDISTPSPPPPDSSTPSSPSTPSISPPPPSSTTTPSPPQLTPSNPGSPANPGGIQPPPPPPLSPSQSVSSGLVAGMTIAGVVVIVVALIITWFCVKKKKRRDVESHYPPPPAPPLAFKDGAYNQQQQQQHYWQSNPPPPANHVVGAVPKPKPSPPPASRPPLSPPVISSSGGSGSNYSGSENSLATAPSGISLGFSQSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVFPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGKLTMDWSTRLKIALGSAKGLAYLHEDCNPKIIHRDIKAANILLDLKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYAASGKLTEKSDVYSYGVMLLELITGRRPVDATQSFMEDGLLDWARPLLLKATEEGIYDGLVDPKLHDNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDSSLSDLNEGTRPGHSTAYNSYGSSDYDTAQYNEDLKKFRKMALASQEYGAGSEYSEPTSEYGLYPSASSGNVQTTQETGTTTLKRESEGFSRSS | 635 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 44129632 | 44132501 | - | evm.model.ptg000008l.785 | HCH8g0750 | 549848 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 1 | 122 | - | - | |
HCH8g0750 | 635 | Gene3D | Phosphorylase Kinase; domain 1 | 223 | 340 | - | - | |
HCH8g0750 | 635 | Pfam | Protein tyrosine and serine/threonine kinase | 270 | 538 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH8g0750 | 635 | ProSiteProfiles | Protein kinase domain profile. | 265 | 544 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH8g0750 | 635 | PRINTS | Proline rich extensin signature | 23 | 44 | - | - | |
HCH8g0750 | 635 | PRINTS | Proline rich extensin signature | 48 | 64 | - | - | |
HCH8g0750 | 635 | PRINTS | Proline rich extensin signature | 8 | 20 | - | - | |
HCH8g0750 | 635 | Gene3D | Transferase(Phosphotransferase) domain 1 | 341 | 551 | - | - | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 194 | 216 | - | - | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 217 | 236 | - | - | |
HCH8g0750 | 635 | SUPERFAMILY | Protein kinase-like (PK-like) | 244 | 538 | IPR011009 | - | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 543 | 565 | - | - | |
HCH8g0750 | 635 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 341 | 549 | - | - | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 544 | 565 | - | - | |
HCH8g0750 | 635 | ProSitePatterns | Protein kinases ATP-binding region signature. | 271 | 293 | IPR017441 | GO:0005524(InterPro) | |
HCH8g0750 | 635 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 385 | 397 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH8g0750 | 635 | FunFam | proline-rich receptor-like protein kinase PERK1 | 243 | 340 | - | - | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 592 | 635 | - | - | |
HCH8g0750 | 635 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 80 | 582 | IPR047117 | - | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 600 | 629 | - | - | |
HCH8g0750 | 635 | SMART | serkin_6 | 265 | 538 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 1 | 118 | - | - | |
HCH8g0750 | 635 | MobiDBLite | consensus disorder prediction | 176 | 236 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH13g0628 | HCH-Chr13:4892828 | HCH8g0750 | HCH-Chr8:44129632 | 4.10E-124 | dispersed | |
HCH1g1033 | HCH-Chr1:58269519 | HCH8g0750 | HCH-Chr8:44129632 | 2.50E-126 | dispersed | |
HCH2g0440 | HCH-Chr2:47723369 | HCH8g0750 | HCH-Chr8:44129632 | 4.80E-155 | dispersed | |
HCH6g0117 | HCH-Chr6:1465601 | HCH8g0750 | HCH-Chr8:44129632 | 4.70E-85 | dispersed | |
HCH7g0254 | HCH-Chr7:1751507 | HCH8g0750 | HCH-Chr8:44129632 | 1.10E-60 | dispersed | |
HCH8g0026 | HCH-Chr8:1079082 | HCH8g0750 | HCH-Chr8:44129632 | 3.60E-76 | dispersed | |
HCH8g0646 | HCH-Chr8:43267767 | HCH8g0750 | HCH-Chr8:44129632 | 1.50E-79 | dispersed | |
HCH8g0661 | HCH-Chr8:43383304 | HCH8g0750 | HCH-Chr8:44129632 | 5.10E-83 | dispersed | |
HCH8g0750 | HCH-Chr8:44129632 | HCH8g1000 | HCH-Chr8:46079452 | 4.10E-74 | dispersed | |
HCH9g0850 | HCH-Chr9:6038184 | HCH8g0750 | HCH-Chr8:44129632 | 3.10E-65 | dispersed | |
HCH11g0894 | HCH-Chr11:39884252 | HCH8g0750 | HCH-Chr8:44129632 | 4.80E-65 | transposed | |
HCH7g0551 | HCH-Chr7:4381580 | HCH8g0750 | HCH-Chr8:44129632 | 1.50E-40 | transposed | |
HCH10g0465 | HCH-Chr10:3807132 | HCH8g0750 | HCH-Chr8:44129632 | 1.70E-187 | wgd | |
HCH12g0307 | HCH-Chr12:1750906 | HCH8g0750 | HCH-Chr8:44129632 | 3.00E-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81702 | PF07714 | PK_Tyr_Ser-Thr | 5.20E-46 | CL0016 | HCH | PK |
Pathway information
