Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0768 ATGAGTTCGACTAAATCCGGTCACAGTGTGAGCTTCGCTGCTCCGAGGCCGTATACGACGAAACTGAAATCTGATCTGAAAGAAACCTTCTTTCCTGATGATCCATTCAAGCAGTTTCGTGATGATAGACCATTGTATAGACTAAAGAATGCCGTACAATATTTCATTCCAATATTGGAATGGCTTCCCAAATACAATTTGAGTATGTTCAAATATGATTTGCTTGCTGGTATTACCATTTCAAGTCTCGCTATTCCTCAAGGAATCAGCTACGCAAAGCTTGCCGCTCTCCCTCCGATTATCGGCCTTTATTCGAGCTTTGTCCCGCCGCTAATTTACGCGGTGTTCGGAAGCTCAAAGCATCTGGCTGTGGGGACGGTGGCGGCTTGTTCGCTTCTCATAGCAGACACCATTGGACGGGTTGCTCCGCCGGAAGCGAACCCCACATTGTATCTTCACCTGGTTTTTACCGCCACCCTCGTCACCGGTGTTGTTCAAACGGCGTTAGGTCTTCTACGGCTGGGAATTTTGGTAGATTTCTTATCACATTCAACGATCATCGGATTCATGGGAGGGACGGCGGTGATAATTTGTTTGCAACAGTTGAAAGGGATCTTTGGATTGACCAAATTCACGACCAAAACGGACGTCTATTCGGTATTGAAGGCCGTTCTGAGCCATAGGCATGAGTGGAAATGGCAGAGTGCAGTCGTCGGGATTATCTTCCTCGCCTTCCTCCAATATACTAGGCACCTGAGAGACAGAAAACCTAAATTATTTTGGGTTTCGGCGATAGCTCCCATGATCACAGTGATAATCGGGTGTTTATTTGCATTATTCGTAAAGGGAGAAAAACATGGAATTCTTACGGTGGGTCACTTGAGCAAAGGAATAAATCCTCTTTCCATTAATCACTTGGTATTTGACTCTAAATATCTACCATCGGTAGTACAAGCTGGCGTGATCACTGGTCTTGTGGCTTTGGCGGAAGGTATAGCAATCGGTCGGAGCTTTGCTATTATGAAAAACGAACAAATTGATGGCAATAAAGAGATGGTAGCCTTTGGTTTGATGAATATAGTTGGATCCTTCACTTCATGCTACTTGACCACCGGGCCATTTTCAAAGACAGCAGTGAACTTCAATGCTGGGTGTAAGACGGCGATGTCGAACATCGTGATGGCGGTGTGCATGGCTCTGACGCTTCTCTTTCTAGCTCCCCTCTTCAGCCACACACCTCTCGTTGCTCTTTCCGCCATTATCATGTCTGCCATGTTGGGACTCATCAAGTTCGACGAGATTTATCACCTGTTTAAGGTTGACAAGTTCGATTTCTGCATTTGCATGGCTGCTTTTCTTGGTGTTGCCTTATTAACCATGGAAGTCGGCATCATGCTTTCGGTGGGATTTGCTTTGCTTAGAGCACTTCTATACATGGCTAGACCGGCGACTTGTAGGCTCGGGAAATTACCCGACTCGATTTTGTACCGAGACATAGAGCAATATCCTGATTCAATGAGAGATCCAGGCGTTCTTGTTCTTCAATTGGGTTCCCCTATTTATTATGCAAACGCCAACTATATCAAGGAGAGGATTTTAAGGTGGGTTCGAGATGAACAAGCCGTTTCAGATTCATCAAAACCTGGATTGGTTGAATATGTATTGCTTGATTTGAGTGGAATTACGTCCATCGACGTGACAGGAATTGAAGCTCTAGTCGAAATCCGCAGATTGTTACAATCGAAAGGAATTCATATGGGAATCGTAAACCCAAGAACTGTAGTAATGGAGAAGATGATAGCTTCAAAGTTCGTAGACACAATCGGGAAAGAGAATATACATTTATCAGTAGATGATGGTGTTAAAATGTGCGAGCTTTTGAAAATTCAAAGATCTAAAGAAGCCGATGAAACTCCTCCAGTAACAGCATAA 1932 44.25 MSSTKSGHSVSFAAPRPYTTKLKSDLKETFFPDDPFKQFRDDRPLYRLKNAVQYFIPILEWLPKYNLSMFKYDLLAGITISSLAIPQGISYAKLAALPPIIGLYSSFVPPLIYAVFGSSKHLAVGTVAACSLLIADTIGRVAPPEANPTLYLHLVFTATLVTGVVQTALGLLRLGILVDFLSHSTIIGFMGGTAVIICLQQLKGIFGLTKFTTKTDVYSVLKAVLSHRHEWKWQSAVVGIIFLAFLQYTRHLRDRKPKLFWVSAIAPMITVIIGCLFALFVKGEKHGILTVGHLSKGINPLSINHLVFDSKYLPSVVQAGVITGLVALAEGIAIGRSFAIMKNEQIDGNKEMVAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNIVMAVCMALTLLFLAPLFSHTPLVALSAIIMSAMLGLIKFDEIYHLFKVDKFDFCICMAAFLGVALLTMEVGIMLSVGFALLRALLYMARPATCRLGKLPDSILYRDIEQYPDSMRDPGVLVLQLGSPIYYANANYIKERILRWVRDEQAVSDSSKPGLVEYVLLDLSGITSIDVTGIEALVEIRRLLQSKGIHMGIVNPRTVVMEKMIASKFVDTIGKENIHLSVDDGVKMCELLKIQRSKEADETPPVTA 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44302138 44307721 + evm.model.ptg000008l.767 HCH8g0768 549866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0768 643 SUPERFAMILY SpoIIaa-like 504 624 IPR036513 -
HCH8g0768 643 FunFam Sulfate transporter 31 481 626 - -
HCH8g0768 643 NCBIfam sulfate permease 57 619 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
HCH8g0768 643 Gene3D STAS domain 496 628 IPR036513 -
HCH8g0768 643 ProSiteProfiles STAS domain profile. 501 624 IPR002645 -
HCH8g0768 643 PANTHER SULFATE TRANSPORTER 42 625 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
HCH8g0768 643 CDD STAS_SulP_like_sulfate_transporter 502 617 - -
HCH8g0768 643 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
HCH8g0768 643 Pfam Sulfate permease family 70 451 IPR011547 GO:0016020(InterPro)
HCH8g0768 643 Pfam STAS domain 503 619 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g1247 HCH-Chr7:45318031 HCH8g0768 HCH-Chr8:44302138 1.40E-194 dispersed
HCH4g1371 HCH-Chr4:10035240 HCH8g0768 HCH-Chr8:44302138 6.40E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0768 K17471 - csv:116402148 1005.74