Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0809 ATGGAAGATCAGAAAGCAAACCTAGTTGCTCTTTCATCAATTCTTTTCCTCCTCATCCTCGTCATTATAGCTCGAATCTTCCTCAAACTCTCCAAAGCTTTCTTTCTCATTTGCGGAATCGTCGTCGCTGTAATCGCCGCAATCTTAGTTTACATGGTAATCAGATTCCGTTACAATCGGAGAAGAAAGCAGCTCGAATCTCAATTAGTTTCCGAAGGCCGAGAACTCCGAATCGAATACAGTTTTCTACGAAAGGTCGCCGGAGTCCCGACGAAGTTCCGGTATAGAGAACTCGAAGAAGCAACCGATTACTTCCGATCGAAAATCGGTCAAGGCTCGTCCGGTTCTGTATTCAAAGGAATCCTCAAAGACGGGACCGCCGTCGCCGTGAAACGGATCGAAGGAGAAAAACACGGCGAGAAAGAATTCCGAGCAGAAGTCTCCGCCATTGCTAGCGTTCAACACATAAATCTCGTTCACTTATTAGGTTATTGTACGAAAAATCCAAACCCTAGATTTCTCGTTTACGAATTCGTCCCTAATGGATCCCTAGATACCTGGATTTTCCCCCCAAAATCACGCCATAATCACAAACACCGCTTCCATTCCAACGCCGGCGGTTGCTTACCGTGGAATCTCCGATACGGAGTCGCAGTCGACGTGGCAAAAGCACTCTCCTATCTCCACCATGATTGCCGATCAAGAATCCTCCATCTCGACGTAAAACCCGAAAACATCCTCCTCGACGGAAATTACAGAGCAATCGTATCGGATTTCGGCCTTTCGAAACTAATGGAGAAAGACGAAAGCAGAGTAATAACATCAGTGAGAGGGACGAAAGGGTATTTAGCTCCAGAATGGTTACTAGAACACGGAATTTCAGAAAAATCAGACATTTACAGCTACGGAATGGTGCTTTTGGAATTAGTCGGAGGGCAGAGGAACGTGAGTTTGATTGAGAATTGTGACGGTGATAAATCAAAGAGGAAATGGCAGTATTTTCCGAGGATCGTGAAAACGAAAATGAAGGAAGGGAAATTAATGGAAGTAGTGGATTCGAGATTGTTGGAAAATGAAAATGGGAATGGCGGAATTGTTGATGAGAGAGAAGTTAAGAGATTGGTGAATATAGCGTTTTGGTGTATACAAGAGAAAGCGAGGTTAAGGCCGACGATGGGGAAGGTGGTGGAAATGCTTGAAGGGCGAGTGACGGTGGAGGAGCCGCCGGAAACGGAGATGGTGATTGTTGATTTGCTGGCGATTGATGAAGAGACAGTGGATTGTAATGAAAGGCCAGATCTTGCTGCTTTTGGTGAACGGGAGAGAGAAAGATATCTTCCGTCGTCGTCGTCGTCGTCGTATTCGTATACCATATCGACGCTTTCTGCCCGGTGA 1395 45.73 MEDQKANLVALSSILFLLILVIIARIFLKLSKAFFLICGIVVAVIAAILVYMVIRFRYNRRRKQLESQLVSEGRELRIEYSFLRKVAGVPTKFRYRELEEATDYFRSKIGQGSSGSVFKGILKDGTAVAVKRIEGEKHGEKEFRAEVSAIASVQHINLVHLLGYCTKNPNPRFLVYEFVPNGSLDTWIFPPKSRHNHKHRFHSNAGGCLPWNLRYGVAVDVAKALSYLHHDCRSRILHLDVKPENILLDGNYRAIVSDFGLSKLMEKDESRVITSVRGTKGYLAPEWLLEHGISEKSDIYSYGMVLLELVGGQRNVSLIENCDGDKSKRKWQYFPRIVKTKMKEGKLMEVVDSRLLENENGNGGIVDEREVKRLVNIAFWCIQEKARLRPTMGKVVEMLEGRVTVEEPPETEMVIVDLLAIDEETVDCNERPDLAAFGERERERYLPSSSSSSYSYTISTLSAR 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44662569 44663963 - evm.model.ptg000008l.726 HCH8g0809 549907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0809 464 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524(InterPro)
HCH8g0809 464 Pfam Protein kinase domain 107 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0809 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0809 464 FunFam Putative receptor-like protein kinase 179 407 - -
HCH8g0809 464 SMART serkin_6 103 399 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0809 464 ProSiteProfiles Protein kinase domain profile. 103 403 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0809 464 Gene3D Transferase(Phosphotransferase) domain 1 179 415 - -
HCH8g0809 464 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
HCH8g0809 464 FunFam Putative receptor-like protein kinase 70 178 - -
HCH8g0809 464 SUPERFAMILY Protein kinase-like (PK-like) 85 400 IPR011009 -
HCH8g0809 464 PANTHER OS07G0415500 PROTEIN 36 414 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g0809 HCH-Chr8:44662569 HCH3g0588 HCH-Chr3:4026380 1.20E-54 dispersed
HCH8g0809 HCH-Chr8:44662569 HCH4g0439 HCH-Chr4:2869914 1.30E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81704 PF00069 Pkinase 9.20E-44 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0809 - - - 0.0