Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0902 ATGGCATTTGATCAAAACTCAATTCCTCAAGGTTTACGTCCTTTAAACGTAGCTAGAACTGTAGTTGAAGATCCTCGCATTACTCCAACTCAAAATCCTGATTGGTTTATGCCTATCCCTAACCCTCCCCGTGACGGTGTGAGCTCTGAGCCGGTACCGGTTTCTTATCCGTCGAAGGTATCTGATGTTGGAATTGTAGGGCTAGGATATGGGAATGTGGTTACTGGTGTTACACCCTGGTGCCCTCGTATGCCTTCTCCCGTTCTGCATCCTGCTACGGTTCCGGCTGTGGGGTTTAGTTATAGCCCGAACGTGAATATCGTTAATCGCGGCGGTGTCAATGCCGTTGATCTTGCTAGTAATGGCATGTCCATTCATAATCTGAATCTGAGTCATCGAGTGGGTAGAAATGTTATAGATTCTGTGAGCAATGATATCTCAATGGGGTCTGGCAATAATGTCAATCCGGGCAATAAGGTTGTTGCAAATGGTGATCAGACTAGTAGTGATTGTAGTTCTGGATTTGGCCCCAATTTGGGGAATTTGGTTAGTGGGAATGTGGCTGATCAAGTGAGTGAGGAGAGTGGGGATGGTTTGGGTTCGAGAAAGAAAATCAAGTTCTTGTGTAGTTTCGATGGCAAGATTTTACCTAGACCGAGTGATGGGGTGTTGAGATATGTAGGAGGTCAAACTAGGATTATAAGTGTTAGAAGAGATGTGAGTTTCAATGAGCTTGTTCAAAAGATGGTCGATGCCTACGGGCAGCCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTCGATGCATTGGTTTCGGTTTCGTGCCTTGATGATCTTGAGAATATGATGGATGAATATGAGAAGTTGGCTGAGAGGTCTCTGGACGGGTCGGCTAAATTAAGAATGTTTTTGTTTTCTGCTTCAGAACTTGACTCTTCAGGTATGGTGCAATTTGGTGATTTACTTGATAGTGGGCAGAGATATGTCGATACCGTGAATGGGATAATTGATGGGGTTGGTGGCCGTATCACTAGGAAAGAGAGCTTTGCAAGTGCTACTTCAACTCAGAATTCTGACTATAGTGGGACTGAGGCAGTTGATACCTCATATAATGATCTAGGGGATTTGACTGGGCTTCAATCCACAACATTGGCCTCTCCTGGGGGAAATTTAGGTACTTCAATTGCTATAGGCCCAGGATTAGTAAATGTGGATCCCGCCTCTGCAGTTCTTGTTGATTCTTCTGCTGTTCCGTTAAGTCATCCCGTGGTTAACTCTGGTCCTCCTGAAGCTTTAGCTTCTCCCCTGCCAGAGCTGGAGTTAGGAAGGTCTGTACCTGTTGCTCTGATACAGCAACAACCAGGAATTGATTTTCCACCACCTGCATCTCACTTACAGCCTTCTATTGATCCTCGCCAAGCAGCATGTGTTAATTATGTACAATTTCGTCCACAGTTGGGCTTTCCAAATCATCATCTGTTAGGAATGCCTGGATCTATGTTTGTCCAACAGCCAAATTCGATGGGAATGACCCCTCATCAGTTTGTTCCTGGAGTTCACATGACGATGAATCCCTCATCTTCGCACTTTAGTATTAGGCCGAATACCTTTCAGCCATTGGTGCAACATCCACAATCCCAGACGGAATATTTTGTCAATGAGAGCACATTTGGGCCAAGGTTTGTCCAGGTCTCTGCAGAACAAAGCTACAACTCGTATCAGGCTTCAGCTCCCCCAGTATCAGTAGGAGGTGGAATTGGTTTACATCCGGTACCCTGGTCCAACCATGCAATTATGTCTGATGGATTGGTATCCCATCAACAGGTAACTTTTCCTGACAAAATTGAGAGGGTAGATAACTGTTATCTGTGTCAGACAGCAGTGCCTCATGCTCATTCTGATTCTTTGTTACCGGATCAAAGAGAGAATTTCACAAATCCTGTATCTGATACAAATTCTTCTGCTCATAGTTTTTATTTGGAAGATCATTCAACATCCCAGCCAATGAAATTTTTTACAGCAACTGGAGTTTTGGGACAACAAACTCTTGAACAAGGGGCTGGGATGCAGACCGGGGTCTTTAGTCCTAAGGATTCTGAAGTTAGAAAACCTTCATTAGAGGCCTCTCATAATATTGAGGGTCAGCATGAAAATGAGAGCATTAGACGGAGAGATCAAGATAATCTTGATCGTACTAGGTTCTCAGCTCTGCAGAGTGCTGTTCGAAGGCAAGGTGATATCCAGTCGCCCTGTGTTGGTGTCATGGATAAAATTCCTCACACTTGCCAAGATGATGCTTTCCAGCTGCATCAAACAGCCATAGAGAATTGGGTTAATCCAAATCTAGACCTAGATAAACATGATCTTCATTTTGGAGGTATTCCTGTCCCTACTTCAGAGTACATTGTCCATGAAAATCCAAAAGAATACTATGACAGGCAGGGTGGCATTATTCCAAATGAATCTAATACTGATACAGGCATCTGGTATGACCATCTCAGACCAATTGTTGGAAAATTGGAAACTCTTAATGTATGCCCAACCGATATTTGTGCTAATAAAGATCACTGTGAGTCACCCATTGAAAGAATTAAGAAGGAAGACAATTTTGATAACAATTCACAACCAGCTTCAGAGAGCGAAGTTCTACTAGATAACAACTTTGTGAAGCCCAGAGTGATTCTTGACACAATTCACCTGAAACCAACTGTTTTTGCATGCTCCCCATCAGAGGTTTTCAATCTGCCGAATGTACGACCTGTCGAGTCTCGTGAAGTGGCACAACCTTCCAGTAGGGATTATCTCGGATCATTACCACAGTCGAAAAACGGAATACAACATTTAGAACCCAACGAAGTTTGCCATGGCATAAATTCCCAATTATTTGACATGAAAACTGACCATATAAATGATAGAATACCAATTTCTACCGAGTGGAAGGAAGACACTAGCCTATTCCAGCCCAAGATGGTATCTAATGATGTTGATGCTGTTTGTTTGCCTAGGAGAACTGGAGATGTGCAGGACACCGCAAATTCACTCTTCAGCAATCAGGATCCTTGGAAATTACAGAATGATACTCATTTTTTTCCTCCTAGGCCAAATAAAATCCAACTAAGAAATGAAGCCATTTCCACCAGGGAGCCCTTGACTGAGAGTCATTTTAGGAATATCGGAGAACTAAATCCAGAAGCATTATTGGAGGATGGATTGTGTCACTCATTGGTAATCTCAAACGAGGGTACGAGTTTAGAGAGTGCCCAGTCCACGAAAGCCAGCTCTTCAGAGGAACAAATCAAGAAAGAGCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCCGTTTTTCAGTCAGTGAAATCCTCCAACTCTGACTTGCATGAGAAAAGTGACTCAGTTTGTGAGCCTAGTACCAGAGATGTTCAAAATAGCAATGTAGGTTTGCAGCCTAAATCTAATATTGAGGATATCAGTACAAAACAACCAGAGAAAGTAAATCTTGGTTTTCCAATATCTGATGGCATTGGCCGCTTGCAGATCATCAAGAATAGTGACCTTGAAGAATTAAAAGAGCTAGGTTCTGGCACCTTCGGCACTGTTTATCATGGAAAATGGAGGGGGACTGATGTTGCTATCAAACGAATTAATGATAGGTGTTTTGCTGGGAAGCCTTCTGAACAGGATCGCATGAGAGAGGATTTCTGGAATGAAGCAATCAAACTCGCTGATCTGCACCATCCAAATGTGGTTGCTTTTTATGGCGTTGTGCTTGATGGCCCTGGGGATTCTGTAGCGACAGTAACAGAATTTATGGTTAATGGCTCACTCAGAAATGCTTTGCTGAAGAATGAGAAGAGTCTTGACAAGCGCAAGCGTCTCTTGATTGCTATGGATGTGGCTTTCGGAATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTGAAAAGTGATAATCTACTTGTCAACCTTCGAGATCCTCATCGCCCGATATGCAAGGTCGGTGATTTGGGCCTATCCAAGGTGAAATGTCAGACGTTGATATCAGGTGGTGTGCGGGGAACCCTTCCATGGATGGCACCTGAGCTTCTGAATGGGAGCAGCAACCTTGTGTCTGAGAAGGTTGATGTCTTTTCATTTGGTATCGTCTTGTGGGAACTCCTTACTGGAGAAGAACCTTATGCAGATTTGCACTATGGGGCCATCATAGGTGGCATAGTAAGTAACACGTTGCGACCTCCAGTACCGGAATCTTGTGATTCAGAATGGAGATCACTGATGGAGAGATGTTGGTCAGCAGAGCCATCAGAGAGGCCAAACTTCACTGAAATCGCAAATGAATTACGCTCCATGACTGCAAAAATTCCTCCCAAGTAA 4380 43.58 MAFDQNSIPQGLRPLNVARTVVEDPRITPTQNPDWFMPIPNPPRDGVSSEPVPVSYPSKVSDVGIVGLGYGNVVTGVTPWCPRMPSPVLHPATVPAVGFSYSPNVNIVNRGGVNAVDLASNGMSIHNLNLSHRVGRNVIDSVSNDISMGSGNNVNPGNKVVANGDQTSSDCSSGFGPNLGNLVSGNVADQVSEESGDGLGSRKKIKFLCSFDGKILPRPSDGVLRYVGGQTRIISVRRDVSFNELVQKMVDAYGQPVVIKYQLPDEDLDALVSVSCLDDLENMMDEYEKLAERSLDGSAKLRMFLFSASELDSSGMVQFGDLLDSGQRYVDTVNGIIDGVGGRITRKESFASATSTQNSDYSGTEAVDTSYNDLGDLTGLQSTTLASPGGNLGTSIAIGPGLVNVDPASAVLVDSSAVPLSHPVVNSGPPEALASPLPELELGRSVPVALIQQQPGIDFPPPASHLQPSIDPRQAACVNYVQFRPQLGFPNHHLLGMPGSMFVQQPNSMGMTPHQFVPGVHMTMNPSSSHFSIRPNTFQPLVQHPQSQTEYFVNESTFGPRFVQVSAEQSYNSYQASAPPVSVGGGIGLHPVPWSNHAIMSDGLVSHQQVTFPDKIERVDNCYLCQTAVPHAHSDSLLPDQRENFTNPVSDTNSSAHSFYLEDHSTSQPMKFFTATGVLGQQTLEQGAGMQTGVFSPKDSEVRKPSLEASHNIEGQHENESIRRRDQDNLDRTRFSALQSAVRRQGDIQSPCVGVMDKIPHTCQDDAFQLHQTAIENWVNPNLDLDKHDLHFGGIPVPTSEYIVHENPKEYYDRQGGIIPNESNTDTGIWYDHLRPIVGKLETLNVCPTDICANKDHCESPIERIKKEDNFDNNSQPASESEVLLDNNFVKPRVILDTIHLKPTVFACSPSEVFNLPNVRPVESREVAQPSSRDYLGSLPQSKNGIQHLEPNEVCHGINSQLFDMKTDHINDRIPISTEWKEDTSLFQPKMVSNDVDAVCLPRRTGDVQDTANSLFSNQDPWKLQNDTHFFPPRPNKIQLRNEAISTREPLTESHFRNIGELNPEALLEDGLCHSLVISNEGTSLESAQSTKASSSEEQIKKELQAVAEGVAASVFQSVKSSNSDLHEKSDSVCEPSTRDVQNSNVGLQPKSNIEDISTKQPEKVNLGFPISDGIGRLQIIKNSDLEELKELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQDRMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGDSVATVTEFMVNGSLRNALLKNEKSLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSNLVSEKVDVFSFGIVLWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDSEWRSLMERCWSAEPSERPNFTEIANELRSMTAKIPPK 1459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45359442 45365607 - evm.model.ptg000008l.633 HCH8g0902 550000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0902 1459 CDD STKc_MAP3K-like 1192 1449 - -
HCH8g0902 1459 Gene3D Transferase(Phosphotransferase) domain 1 1274 1457 - -
HCH8g0902 1459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1311 1323 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0902 1459 Coils Coil 277 297 - -
HCH8g0902 1459 SMART serkin_6 1186 1452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0902 1459 ProSiteProfiles Protein kinase domain profile. 1186 1453 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g0902 1459 MobiDBLite consensus disorder prediction 695 730 - -
HCH8g0902 1459 Gene3D - 225 308 - -
HCH8g0902 1459 Gene3D Phosphorylase Kinase; domain 1 1179 1273 - -
HCH8g0902 1459 Pfam Protein tyrosine and serine/threonine kinase 1188 1449 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0902 1459 SUPERFAMILY CAD & PB1 domains 220 312 - -
HCH8g0902 1459 Pfam PB1 domain 224 307 IPR000270 GO:0005515(InterPro)
HCH8g0902 1459 MobiDBLite consensus disorder prediction 1126 1150 - -
HCH8g0902 1459 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1274 1459 - -
HCH8g0902 1459 SUPERFAMILY Protein kinase-like (PK-like) 1178 1448 IPR011009 -
HCH8g0902 1459 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 224 308 - -
HCH8g0902 1459 ProSitePatterns Protein kinases ATP-binding region signature. 1192 1223 IPR017441 GO:0005524(InterPro)
HCH8g0902 1459 SMART PB1_new 219 308 IPR000270 GO:0005515(InterPro)
HCH8g0902 1459 PANTHER SERINE-THREONINE PROTEIN KINASE 162 1452 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
HCH8g0902 1459 CDD PB1_UP2 208 306 - -
HCH8g0902 1459 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1179 1273 - -
HCH8g0902 1459 MobiDBLite consensus disorder prediction 701 730 - -
HCH8g0902 1459 MobiDBLite consensus disorder prediction 1136 1150 - -
HCH8g0902 1459 PRINTS Tyrosine kinase catalytic domain signature 1420 1442 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0902 1459 PRINTS Tyrosine kinase catalytic domain signature 1268 1281 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0902 1459 PRINTS Tyrosine kinase catalytic domain signature 1305 1323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g0902 1459 PRINTS Tyrosine kinase catalytic domain signature 1376 1398 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0265 HCH-Chr10:2193555 HCH8g0902 HCH-Chr8:45359442 2.40E-141 dispersed
HCH11g0815 HCH-Chr11:38560891 HCH8g0902 HCH-Chr8:45359442 2.10E-29 dispersed
HCH1g1073 HCH-Chr1:58505150 HCH8g0902 HCH-Chr8:45359442 7.10E-25 dispersed
HCH8g0316 HCH-Chr8:24802619 HCH8g0902 HCH-Chr8:45359442 1.90E-101 dispersed
HCH8g0813 HCH-Chr8:44679422 HCH8g0902 HCH-Chr8:45359442 3.80E-08 dispersed
HCH8g0902 HCH-Chr8:45359442 HCH9g0516 HCH-Chr9:3311571 6.40E-46 dispersed
HCH8g0902 HCH-Chr8:45359442 HCH3g0500 HCH-Chr3:3237128 1.70E-144 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81710 PF07714 PK_Tyr_Ser-Thr 2.30E-60 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0902 - - - 0.0