Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH8g0902 | ATGGCATTTGATCAAAACTCAATTCCTCAAGGTTTACGTCCTTTAAACGTAGCTAGAACTGTAGTTGAAGATCCTCGCATTACTCCAACTCAAAATCCTGATTGGTTTATGCCTATCCCTAACCCTCCCCGTGACGGTGTGAGCTCTGAGCCGGTACCGGTTTCTTATCCGTCGAAGGTATCTGATGTTGGAATTGTAGGGCTAGGATATGGGAATGTGGTTACTGGTGTTACACCCTGGTGCCCTCGTATGCCTTCTCCCGTTCTGCATCCTGCTACGGTTCCGGCTGTGGGGTTTAGTTATAGCCCGAACGTGAATATCGTTAATCGCGGCGGTGTCAATGCCGTTGATCTTGCTAGTAATGGCATGTCCATTCATAATCTGAATCTGAGTCATCGAGTGGGTAGAAATGTTATAGATTCTGTGAGCAATGATATCTCAATGGGGTCTGGCAATAATGTCAATCCGGGCAATAAGGTTGTTGCAAATGGTGATCAGACTAGTAGTGATTGTAGTTCTGGATTTGGCCCCAATTTGGGGAATTTGGTTAGTGGGAATGTGGCTGATCAAGTGAGTGAGGAGAGTGGGGATGGTTTGGGTTCGAGAAAGAAAATCAAGTTCTTGTGTAGTTTCGATGGCAAGATTTTACCTAGACCGAGTGATGGGGTGTTGAGATATGTAGGAGGTCAAACTAGGATTATAAGTGTTAGAAGAGATGTGAGTTTCAATGAGCTTGTTCAAAAGATGGTCGATGCCTACGGGCAGCCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTCGATGCATTGGTTTCGGTTTCGTGCCTTGATGATCTTGAGAATATGATGGATGAATATGAGAAGTTGGCTGAGAGGTCTCTGGACGGGTCGGCTAAATTAAGAATGTTTTTGTTTTCTGCTTCAGAACTTGACTCTTCAGGTATGGTGCAATTTGGTGATTTACTTGATAGTGGGCAGAGATATGTCGATACCGTGAATGGGATAATTGATGGGGTTGGTGGCCGTATCACTAGGAAAGAGAGCTTTGCAAGTGCTACTTCAACTCAGAATTCTGACTATAGTGGGACTGAGGCAGTTGATACCTCATATAATGATCTAGGGGATTTGACTGGGCTTCAATCCACAACATTGGCCTCTCCTGGGGGAAATTTAGGTACTTCAATTGCTATAGGCCCAGGATTAGTAAATGTGGATCCCGCCTCTGCAGTTCTTGTTGATTCTTCTGCTGTTCCGTTAAGTCATCCCGTGGTTAACTCTGGTCCTCCTGAAGCTTTAGCTTCTCCCCTGCCAGAGCTGGAGTTAGGAAGGTCTGTACCTGTTGCTCTGATACAGCAACAACCAGGAATTGATTTTCCACCACCTGCATCTCACTTACAGCCTTCTATTGATCCTCGCCAAGCAGCATGTGTTAATTATGTACAATTTCGTCCACAGTTGGGCTTTCCAAATCATCATCTGTTAGGAATGCCTGGATCTATGTTTGTCCAACAGCCAAATTCGATGGGAATGACCCCTCATCAGTTTGTTCCTGGAGTTCACATGACGATGAATCCCTCATCTTCGCACTTTAGTATTAGGCCGAATACCTTTCAGCCATTGGTGCAACATCCACAATCCCAGACGGAATATTTTGTCAATGAGAGCACATTTGGGCCAAGGTTTGTCCAGGTCTCTGCAGAACAAAGCTACAACTCGTATCAGGCTTCAGCTCCCCCAGTATCAGTAGGAGGTGGAATTGGTTTACATCCGGTACCCTGGTCCAACCATGCAATTATGTCTGATGGATTGGTATCCCATCAACAGGTAACTTTTCCTGACAAAATTGAGAGGGTAGATAACTGTTATCTGTGTCAGACAGCAGTGCCTCATGCTCATTCTGATTCTTTGTTACCGGATCAAAGAGAGAATTTCACAAATCCTGTATCTGATACAAATTCTTCTGCTCATAGTTTTTATTTGGAAGATCATTCAACATCCCAGCCAATGAAATTTTTTACAGCAACTGGAGTTTTGGGACAACAAACTCTTGAACAAGGGGCTGGGATGCAGACCGGGGTCTTTAGTCCTAAGGATTCTGAAGTTAGAAAACCTTCATTAGAGGCCTCTCATAATATTGAGGGTCAGCATGAAAATGAGAGCATTAGACGGAGAGATCAAGATAATCTTGATCGTACTAGGTTCTCAGCTCTGCAGAGTGCTGTTCGAAGGCAAGGTGATATCCAGTCGCCCTGTGTTGGTGTCATGGATAAAATTCCTCACACTTGCCAAGATGATGCTTTCCAGCTGCATCAAACAGCCATAGAGAATTGGGTTAATCCAAATCTAGACCTAGATAAACATGATCTTCATTTTGGAGGTATTCCTGTCCCTACTTCAGAGTACATTGTCCATGAAAATCCAAAAGAATACTATGACAGGCAGGGTGGCATTATTCCAAATGAATCTAATACTGATACAGGCATCTGGTATGACCATCTCAGACCAATTGTTGGAAAATTGGAAACTCTTAATGTATGCCCAACCGATATTTGTGCTAATAAAGATCACTGTGAGTCACCCATTGAAAGAATTAAGAAGGAAGACAATTTTGATAACAATTCACAACCAGCTTCAGAGAGCGAAGTTCTACTAGATAACAACTTTGTGAAGCCCAGAGTGATTCTTGACACAATTCACCTGAAACCAACTGTTTTTGCATGCTCCCCATCAGAGGTTTTCAATCTGCCGAATGTACGACCTGTCGAGTCTCGTGAAGTGGCACAACCTTCCAGTAGGGATTATCTCGGATCATTACCACAGTCGAAAAACGGAATACAACATTTAGAACCCAACGAAGTTTGCCATGGCATAAATTCCCAATTATTTGACATGAAAACTGACCATATAAATGATAGAATACCAATTTCTACCGAGTGGAAGGAAGACACTAGCCTATTCCAGCCCAAGATGGTATCTAATGATGTTGATGCTGTTTGTTTGCCTAGGAGAACTGGAGATGTGCAGGACACCGCAAATTCACTCTTCAGCAATCAGGATCCTTGGAAATTACAGAATGATACTCATTTTTTTCCTCCTAGGCCAAATAAAATCCAACTAAGAAATGAAGCCATTTCCACCAGGGAGCCCTTGACTGAGAGTCATTTTAGGAATATCGGAGAACTAAATCCAGAAGCATTATTGGAGGATGGATTGTGTCACTCATTGGTAATCTCAAACGAGGGTACGAGTTTAGAGAGTGCCCAGTCCACGAAAGCCAGCTCTTCAGAGGAACAAATCAAGAAAGAGCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCCGTTTTTCAGTCAGTGAAATCCTCCAACTCTGACTTGCATGAGAAAAGTGACTCAGTTTGTGAGCCTAGTACCAGAGATGTTCAAAATAGCAATGTAGGTTTGCAGCCTAAATCTAATATTGAGGATATCAGTACAAAACAACCAGAGAAAGTAAATCTTGGTTTTCCAATATCTGATGGCATTGGCCGCTTGCAGATCATCAAGAATAGTGACCTTGAAGAATTAAAAGAGCTAGGTTCTGGCACCTTCGGCACTGTTTATCATGGAAAATGGAGGGGGACTGATGTTGCTATCAAACGAATTAATGATAGGTGTTTTGCTGGGAAGCCTTCTGAACAGGATCGCATGAGAGAGGATTTCTGGAATGAAGCAATCAAACTCGCTGATCTGCACCATCCAAATGTGGTTGCTTTTTATGGCGTTGTGCTTGATGGCCCTGGGGATTCTGTAGCGACAGTAACAGAATTTATGGTTAATGGCTCACTCAGAAATGCTTTGCTGAAGAATGAGAAGAGTCTTGACAAGCGCAAGCGTCTCTTGATTGCTATGGATGTGGCTTTCGGAATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTGAAAAGTGATAATCTACTTGTCAACCTTCGAGATCCTCATCGCCCGATATGCAAGGTCGGTGATTTGGGCCTATCCAAGGTGAAATGTCAGACGTTGATATCAGGTGGTGTGCGGGGAACCCTTCCATGGATGGCACCTGAGCTTCTGAATGGGAGCAGCAACCTTGTGTCTGAGAAGGTTGATGTCTTTTCATTTGGTATCGTCTTGTGGGAACTCCTTACTGGAGAAGAACCTTATGCAGATTTGCACTATGGGGCCATCATAGGTGGCATAGTAAGTAACACGTTGCGACCTCCAGTACCGGAATCTTGTGATTCAGAATGGAGATCACTGATGGAGAGATGTTGGTCAGCAGAGCCATCAGAGAGGCCAAACTTCACTGAAATCGCAAATGAATTACGCTCCATGACTGCAAAAATTCCTCCCAAGTAA | 4380 | 43.58 | MAFDQNSIPQGLRPLNVARTVVEDPRITPTQNPDWFMPIPNPPRDGVSSEPVPVSYPSKVSDVGIVGLGYGNVVTGVTPWCPRMPSPVLHPATVPAVGFSYSPNVNIVNRGGVNAVDLASNGMSIHNLNLSHRVGRNVIDSVSNDISMGSGNNVNPGNKVVANGDQTSSDCSSGFGPNLGNLVSGNVADQVSEESGDGLGSRKKIKFLCSFDGKILPRPSDGVLRYVGGQTRIISVRRDVSFNELVQKMVDAYGQPVVIKYQLPDEDLDALVSVSCLDDLENMMDEYEKLAERSLDGSAKLRMFLFSASELDSSGMVQFGDLLDSGQRYVDTVNGIIDGVGGRITRKESFASATSTQNSDYSGTEAVDTSYNDLGDLTGLQSTTLASPGGNLGTSIAIGPGLVNVDPASAVLVDSSAVPLSHPVVNSGPPEALASPLPELELGRSVPVALIQQQPGIDFPPPASHLQPSIDPRQAACVNYVQFRPQLGFPNHHLLGMPGSMFVQQPNSMGMTPHQFVPGVHMTMNPSSSHFSIRPNTFQPLVQHPQSQTEYFVNESTFGPRFVQVSAEQSYNSYQASAPPVSVGGGIGLHPVPWSNHAIMSDGLVSHQQVTFPDKIERVDNCYLCQTAVPHAHSDSLLPDQRENFTNPVSDTNSSAHSFYLEDHSTSQPMKFFTATGVLGQQTLEQGAGMQTGVFSPKDSEVRKPSLEASHNIEGQHENESIRRRDQDNLDRTRFSALQSAVRRQGDIQSPCVGVMDKIPHTCQDDAFQLHQTAIENWVNPNLDLDKHDLHFGGIPVPTSEYIVHENPKEYYDRQGGIIPNESNTDTGIWYDHLRPIVGKLETLNVCPTDICANKDHCESPIERIKKEDNFDNNSQPASESEVLLDNNFVKPRVILDTIHLKPTVFACSPSEVFNLPNVRPVESREVAQPSSRDYLGSLPQSKNGIQHLEPNEVCHGINSQLFDMKTDHINDRIPISTEWKEDTSLFQPKMVSNDVDAVCLPRRTGDVQDTANSLFSNQDPWKLQNDTHFFPPRPNKIQLRNEAISTREPLTESHFRNIGELNPEALLEDGLCHSLVISNEGTSLESAQSTKASSSEEQIKKELQAVAEGVAASVFQSVKSSNSDLHEKSDSVCEPSTRDVQNSNVGLQPKSNIEDISTKQPEKVNLGFPISDGIGRLQIIKNSDLEELKELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQDRMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGDSVATVTEFMVNGSLRNALLKNEKSLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSNLVSEKVDVFSFGIVLWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDSEWRSLMERCWSAEPSERPNFTEIANELRSMTAKIPPK | 1459 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 45359442 | 45365607 | - | evm.model.ptg000008l.633 | HCH8g0902 | 550000 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH8g0902 | 1459 | CDD | STKc_MAP3K-like | 1192 | 1449 | - | - | |
HCH8g0902 | 1459 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1274 | 1457 | - | - | |
HCH8g0902 | 1459 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1311 | 1323 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH8g0902 | 1459 | Coils | Coil | 277 | 297 | - | - | |
HCH8g0902 | 1459 | SMART | serkin_6 | 1186 | 1452 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH8g0902 | 1459 | ProSiteProfiles | Protein kinase domain profile. | 1186 | 1453 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH8g0902 | 1459 | MobiDBLite | consensus disorder prediction | 695 | 730 | - | - | |
HCH8g0902 | 1459 | Gene3D | - | 225 | 308 | - | - | |
HCH8g0902 | 1459 | Gene3D | Phosphorylase Kinase; domain 1 | 1179 | 1273 | - | - | |
HCH8g0902 | 1459 | Pfam | Protein tyrosine and serine/threonine kinase | 1188 | 1449 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH8g0902 | 1459 | SUPERFAMILY | CAD & PB1 domains | 220 | 312 | - | - | |
HCH8g0902 | 1459 | Pfam | PB1 domain | 224 | 307 | IPR000270 | GO:0005515(InterPro) | |
HCH8g0902 | 1459 | MobiDBLite | consensus disorder prediction | 1126 | 1150 | - | - | |
HCH8g0902 | 1459 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 1274 | 1459 | - | - | |
HCH8g0902 | 1459 | SUPERFAMILY | Protein kinase-like (PK-like) | 1178 | 1448 | IPR011009 | - | |
HCH8g0902 | 1459 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 224 | 308 | - | - | |
HCH8g0902 | 1459 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1192 | 1223 | IPR017441 | GO:0005524(InterPro) | |
HCH8g0902 | 1459 | SMART | PB1_new | 219 | 308 | IPR000270 | GO:0005515(InterPro) | |
HCH8g0902 | 1459 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 162 | 1452 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
HCH8g0902 | 1459 | CDD | PB1_UP2 | 208 | 306 | - | - | |
HCH8g0902 | 1459 | FunFam | Octicosapeptide/phox/Bem1p domain kinase superfamily protein | 1179 | 1273 | - | - | |
HCH8g0902 | 1459 | MobiDBLite | consensus disorder prediction | 701 | 730 | - | - | |
HCH8g0902 | 1459 | MobiDBLite | consensus disorder prediction | 1136 | 1150 | - | - | |
HCH8g0902 | 1459 | PRINTS | Tyrosine kinase catalytic domain signature | 1420 | 1442 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH8g0902 | 1459 | PRINTS | Tyrosine kinase catalytic domain signature | 1268 | 1281 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH8g0902 | 1459 | PRINTS | Tyrosine kinase catalytic domain signature | 1305 | 1323 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH8g0902 | 1459 | PRINTS | Tyrosine kinase catalytic domain signature | 1376 | 1398 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0265 | HCH-Chr10:2193555 | HCH8g0902 | HCH-Chr8:45359442 | 2.40E-141 | dispersed | |
HCH11g0815 | HCH-Chr11:38560891 | HCH8g0902 | HCH-Chr8:45359442 | 2.10E-29 | dispersed | |
HCH1g1073 | HCH-Chr1:58505150 | HCH8g0902 | HCH-Chr8:45359442 | 7.10E-25 | dispersed | |
HCH8g0316 | HCH-Chr8:24802619 | HCH8g0902 | HCH-Chr8:45359442 | 1.90E-101 | dispersed | |
HCH8g0813 | HCH-Chr8:44679422 | HCH8g0902 | HCH-Chr8:45359442 | 3.80E-08 | dispersed | |
HCH8g0902 | HCH-Chr8:45359442 | HCH9g0516 | HCH-Chr9:3311571 | 6.40E-46 | dispersed | |
HCH8g0902 | HCH-Chr8:45359442 | HCH3g0500 | HCH-Chr3:3237128 | 1.70E-144 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81710 | PF07714 | PK_Tyr_Ser-Thr | 2.30E-60 | CL0016 | HCH | PK |
Pathway information
