Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH8g0947 | ATGCAGAAAACTGATCAAACGGTTCTAAGCTTGAGACCTGGTGGCGGTCGTGGTAGACTCCTTGGTCATTCTTCATCTTCTTCTTCTTCTTCTTCCTCCTTCGCTTTCGGTTCTTTTTCCTCTGATCTCCGTCCCCATACCTCTGCTCCCTCTCCTTTTCCTTTAAAGAGTGGAGGAGATTCACGGTTTGAGAATCGTGACCGTGTTCGTTTTACTCGTGATCAGCTTTTACATCTCCGTGAGGTTGGGGAAGTTCCGGAAGATATACTGAAACTTAAACGAGATATTGAAGTTGAATTTTTCGGTGAGGATCAAAATTGGAGTCATGGCGAGAGCAATGCCAATCAACCTAATCAATCCCAGAGTCGGTATTCTGAGCCAGACAATCGAAACTGGCGTGGCCGTTCTGCACAAGTTTCTGCTTCTGGAGAGGAGAGGTCCAGAGAAACATTTCGAGATAGAGAGTTTGGTGGTCATTTCGACTCTAGAATGCAGGAAGCGAATCAATTGAATCGTCAAGACTCACAATCGACCTGGACCCACACCTCTTCTCACCAAGGGGGAGGACCTCCTGCTTTAATCAAAGCTGATGTACCGTGGTCAGTTAGGAGGGGAACTCTCTCTGACAAGGATCGTGTCTTGAAGACTGTTAAGGGGATATTGAACAAACTAACACCAGAAAAGTTTGATCTGCTCAAGGGTCAACTAATTGACTCTGGAATCACCTCTGCTGATATTTTGAAGGATGTCATTTCACTGATCTTTGACAAAGCTGTTCTTGAGCCCACATTTTGCCCCATGTATGCTCAATTGTGTTCTGATCTTAATGAGAAGCTACCTCAATTCCCATCTGATGAACCTGGTGGAAGGGAAATTACGTTTAAACGAGTTCTCTTAAACATCTGCCAGGAGGCTTTTGAAGAAATGAGGCAGATGACTGCCCCTGAGCAAGAGATGGAGCGCAGGGATAAAGAAAGACTGATGAAACTTCGGACCCTTGGAAATATTCGATTGATTGGGGAGCTTCTGAAGCAAAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTGCAGGAACTCTTAGGATCTGACAACAAAATCTGTCCTGCTGAAGAAAATGTTGAGGCCATCTGTCAGTTCTTTAACACTATAGGTAAGCAGCTAGATGAGAACACAAAAGCACGCCGTATAAATGATACATACTTTACCCGATTGAAGGAACTGATAACACACTCCCAGTTGGCCCCACGATTGAAGTTCATGATTCAAGATGTGCTTGATTTGCGTGCCAACAAATGGATTCCTAGGCGTGAAGAGGTTAAAGCCAAAACTATTACTGAAATACATTCAGAGGCAGAAAAAACTCTGGGACTACGTCCTGGTGCTACAATAAATATAAGAAGTAGTCGTGGCTTTGTGTCTGATTCTACAGGGAATACCAGCCCTGGAGGCTTTCCTATTAATCAAACTGGTTTTGGGGGTATGATGCCTGGCATGCCAAACAGGAAGATGCCCGGTATGCCAGGAATCGATAATGACAATTGGGAGGTACCTAGGACTCGGTCTATATCAAGGGGAACTGGATCTGGTATTCAACCTGCTGGTCGTGGCCAAACACCATTGGTTGGCAAAGCGTCCTTATCAAATGCAAGACTATTACCCCAAGGTACTGGAGGGCACATTACTAACAAGACTAGTGCCCTATTGCAGGGTGCTAGTGCATCTACTACCCGTCCCATTAACGTCAGTCATGGTTTGGAGCCTTCTGCATATGGTCAGAAACCTGTTATGGCACCAATAGCTGTCCAGGTTGTGGATAGACCACAGGTTCCAGCTATAACTTTGAATCAAGATGATCTTAGAAAGAAAACTATTTCTCTTCTTGAAGAATATTTCAGTGTGCGGCTTTTGGATGAGGCTTTACAGTGTGTGGAAGAACTTAAATCACCAGCTTACCACCCTGAGGTTGTGAAGGAAGCCATTTCCCTAGCCCTAGAGAAAAGTCCACCTTGTGTTGAAGCCGTTGTAAAGCTTCTGGAATATTTACTTGCCAAGAAGGTTTTTACAGCTAGAGACATTGGGACTGGATGCTTGCTATATGCTTCTATGATTGATGATATTGGCATTGATTTACCTAAAGCACCAAACAATTTTGGTGAGATTACTGGGAAACTTGTTATTTCTGGTGGTTTGAATTTTCAGGTGGTGAAGGAGGTCCTTAAGAAGGTGGAAGATGACCTATTCAGGAAACTTATATTTGATGGTGTCTTGAGGACGGTTAGTTCTAATTCGTCTGGGCAAGGATTATTGGATTCATTTGCATCTGATATCGAGGCTTGTCGAAGTCTGGCATCTTAA | 2358 | 43.89 | MQKTDQTVLSLRPGGGRGRLLGHSSSSSSSSSSFAFGSFSSDLRPHTSAPSPFPLKSGGDSRFENRDRVRFTRDQLLHLREVGEVPEDILKLKRDIEVEFFGEDQNWSHGESNANQPNQSQSRYSEPDNRNWRGRSAQVSASGEERSRETFRDREFGGHFDSRMQEANQLNRQDSQSTWTHTSSHQGGGPPALIKADVPWSVRRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPQFPSDEPGGREITFKRVLLNICQEAFEEMRQMTAPEQEMERRDKERLMKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSDNKICPAEENVEAICQFFNTIGKQLDENTKARRINDTYFTRLKELITHSQLAPRLKFMIQDVLDLRANKWIPRREEVKAKTITEIHSEAEKTLGLRPGATINIRSSRGFVSDSTGNTSPGGFPINQTGFGGMMPGMPNRKMPGMPGIDNDNWEVPRTRSISRGTGSGIQPAGRGQTPLVGKASLSNARLLPQGTGGHITNKTSALLQGASASTTRPINVSHGLEPSAYGQKPVMAPIAVQVVDRPQVPAITLNQDDLRKKTISLLEEYFSVRLLDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVEAVVKLLEYLLAKKVFTARDIGTGCLLYASMIDDIGIDLPKAPNNFGEITGKLVISGGLNFQVVKEVLKKVEDDLFRKLIFDGVLRTVSSNSSGQGLLDSFASDIEACRSLAS | 785 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 45684931 | 45689639 | - | evm.model.ptg000008l.588 | HCH8g0947 | 550045 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH8g0947 | 785 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 613 | 775 | - | - | |
HCH8g0947 | 785 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 99 | 783 | IPR045208 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER) | |
HCH8g0947 | 785 | SUPERFAMILY | ARM repeat | 208 | 434 | IPR016024 | - | |
HCH8g0947 | 785 | Pfam | MA3 domain | 620 | 731 | IPR003891 | - | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 469 | 487 | - | - | |
HCH8g0947 | 785 | Gene3D | - | 214 | 445 | - | - | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 21 | 47 | - | - | |
HCH8g0947 | 785 | SMART | ma3_7 | 620 | 732 | IPR003891 | - | |
HCH8g0947 | 785 | SMART | if4_15 | 214 | 432 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 106 | 194 | - | - | |
HCH8g0947 | 785 | SUPERFAMILY | ARM repeat | 615 | 773 | IPR016024 | - | |
HCH8g0947 | 785 | Pfam | MIF4G domain | 214 | 432 | IPR003890 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
HCH8g0947 | 785 | Gene3D | - | 613 | 779 | - | - | |
HCH8g0947 | 785 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 205 | 433 | - | - | |
HCH8g0947 | 785 | ProSiteProfiles | MI domain profile. | 619 | 741 | IPR003891 | - | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 469 | 489 | - | - | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 106 | 144 | - | - | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 164 | 187 | - | - | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
HCH8g0947 | 785 | MobiDBLite | consensus disorder prediction | 145 | 161 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g0428 | HCH-Chr12:2475472 | HCH8g0947 | HCH-Chr8:45684931 | 5.60E-259 | dispersed | |
HCH6g1375 | HCH-Chr6:47686395 | HCH8g0947 | HCH-Chr8:45684931 | 6.60E-51 | dispersed | |
HCH7g1465 | HCH-Chr7:47287600 | HCH8g0947 | HCH-Chr8:45684931 | 2.30E-50 | dispersed | |
HCH3g0398 | HCH-Chr3:2593391 | HCH8g0947 | HCH-Chr8:45684931 | 2.00E-08 | transposed | |
HCH12g0427 | HCH-Chr12:2472210 | HCH8g0947 | HCH-Chr8:45684931 | 1.40E-80 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH8g0947 | K03260 | - | csv:101207520 | 1165.6 |