Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g0950 ATGGCAACAACGAGCGAAGGAAAAGCAATCGGAATCGATCTCGGAACGACTTATAGCTGCGTCGGAGTATGGCTCAACGATCGCGTCGAAATAATCCCTAACGATCAAGGTAACCGTACTACTCCTTCTTACGTTGCTTTTACCGATACTGAGCGTTTAATCGGCGACGCCGCCAAGAATCAAGTCTCTATTAATCCTCAAAACACTGTTTTTGATGCTAAACGGTTAATCGGACGCCGACTTTCTGATCCTTCCGTACAAAGCGATATGAAGCTTTGGCCTTTTAAAGTACTTTCTGGACCTAATGATAAACCTATGATTAGTGTTAAATATAAGGGTGAAGATAAGGAGTTTTCTCCTGAAGAGATTTCCTCGATGGTTTTGATTAAAATGAAGGAGATTGCTGAGGCTTTTTTAGGACAAAATGTTAATAATGCTGTTATTACTGTTCCTGCTTATTTTAATGATTCACAAAGGCAAGCTACGAAAGATGCTGGTGTTATTGCGGGGATTAATGTGATGCGTATTATTAACGAGCCGACGGCGGCGGCGATTGCTTATGGTTTGGATAAGAAGGGTTCTCGTAAAGGAGAGCAAAATGTGTTGATTTTTGACCTAGGTGGGGGGACTTTTGATGTGTCCTTGTTGAGTATTGAAGAGGGAATTTTCGAAGTTAAGGCGACGGCGGGTGATACTCATCTTGGTGGTGAGGATTTTGATAATAGGTTGGTGAATCATTTTGTGTTGGAGTTTAGGAGGAAGAATAAGAAGGATATTAGTGGGAATGCTAGGGCGTTGAGGAGGTTAAGGACGGCGTGTGAGAGAGCGAAAAGGGTGTTGTCGTCGACGACGCAGACGACAATTGAGGTTGATTCTTTGTATGAAGGGATTGATTTCTATGCGACGATTACAAGGGCTAGGTTTGAGGAGTTGTGTATGGATTTGTTTATGAAGTGTATGGAGCCGGTGGAGAAGTGTATTCGTGATGCGAAAACAGATAAGAGTTTAGTTGATGAGGTTGTTTTGGTTGGTGGGTCGACGAGAATTCCGAAAGTTCAACAACTTTTGCAGGACTATTTTAACGGGAAGGAGCTTTGTAAAAGTATTAACCCTGATGAGGCTGTGGCTTATGGTGCTGCTGTACAGGCTGCAATTCTGAGTGGAGATGGTGATGAGAAAATTCAAGATTTGCTACTGCTCGATGTCACACCGCTCAGTCTCGGTCTCGAGACAGCAGGAGGTGTGATGACAGTATTAATTCCAAGGAACACGACGATCCCAACAAAGAAAGAACAGATTTTCTCCACTTATTCAGACAATCAACCTGGAGTTTTGATTCAAGTTTACGAAGGAGAGCGAGCGAGAACCAAAGATAACAATTTGCTCGGGAAGTTCGAGCTGACCGGAATTCCACCGGCGCCTAGAGGAGTCCCTCAGATCAATGTCTGCTTTGATATCGATGCCAATGGCATTTTGAATGTAACTGCAGAAGATAAGACTGCTGGGGTGAAGAACAAGATCACAATCACCAATGACAAGGGAAGAATGAGCAAGGATGAGATTGAGAGGTTGGTAAAAGAGGCAGAGAAGTATAAGGCAGAGGATGAGGAAGTGAAGAAGAAAGTGGAAGCGAAGAATTCATTGGAGAATTATGCTTACAACATAAGAACCACTTTAAGGGACGAGAAGATTGGAGGAAAAATGAACCAAGAAGATAAGCAGAAGGTAGAGAAGGCTGTGGAGGAGACAATAGAGTGGTTGGATAGAAACCAATTGGCTGAGGTTGATGAGCTTGAGGATAAGCAGAAGGAGCTGGAGGGTATCTGCAATCCAATCATTGCTAAGATGTATCAGGCCGACGCTCCTCCGATGGGTGCAGATATGCCTGGTGGTGGCGCTGGGCCGAAGATCGAAGAGGTTGATTGA 1926 43.87 MATTSEGKAIGIDLGTTYSCVGVWLNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVSINPQNTVFDAKRLIGRRLSDPSVQSDMKLWPFKVLSGPNDKPMISVKYKGEDKEFSPEEISSMVLIKMKEIAEAFLGQNVNNAVITVPAYFNDSQRQATKDAGVIAGINVMRIINEPTAAAIAYGLDKKGSRKGEQNVLIFDLGGGTFDVSLLSIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVLEFRRKNKKDISGNARALRRLRTACERAKRVLSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDLFMKCMEPVEKCIRDAKTDKSLVDEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGDGDEKIQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVTAEDKTAGVKNKITITNDKGRMSKDEIERLVKEAEKYKAEDEEVKKKVEAKNSLENYAYNIRTTLRDEKIGGKMNQEDKQKVEKAVEETIEWLDRNQLAEVDELEDKQKELEGICNPIIAKMYQADAPPMGADMPGGGAGPKIEEVD 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45700451 45702498 - evm.model.ptg000008l.585 HCH8g0950 550048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g0950 641 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
HCH8g0950 641 FunFam Heat shock 70 kDa protein 197 260 - -
HCH8g0950 641 FunFam Heat shock 70 kDa 391 545 - -
HCH8g0950 641 FunFam heat shock 70 kDa protein-like 71 126 - -
HCH8g0950 641 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
HCH8g0950 641 MobiDBLite consensus disorder prediction 620 641 - -
HCH8g0950 641 Gene3D - 545 619 IPR029048 -
HCH8g0950 641 CDD HSPA1-2_6-8-like_NBD 9 387 - -
HCH8g0950 641 SUPERFAMILY Actin-like ATPase domain 196 388 IPR043129 -
HCH8g0950 641 FunFam Heat shock protein 70 546 619 - -
HCH8g0950 641 Coils Coil 514 545 - -
HCH8g0950 641 FunFam Heat shock protein 70 10 196 - -
HCH8g0950 641 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
HCH8g0950 641 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
HCH8g0950 641 Gene3D Actin; Chain A, domain 4 235 318 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 396 415 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 8 21 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 146 166 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 58 66 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 369 389 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 36 48 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 477 493 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 209 219 - -
HCH8g0950 641 PRINTS 70kDa heat shock protein signature 337 353 - -
HCH8g0950 641 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
HCH8g0950 641 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
HCH8g0950 641 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 622 IPR029048 -
HCH8g0950 641 Gene3D - 71 126 - -
HCH8g0950 641 FunFam Heat shock 70 kDa protein 311 366 - -
HCH8g0950 641 FunFam Heat shock 70 kDa 235 318 - -
HCH8g0950 641 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
HCH8g0950 641 Gene3D - 192 366 - -
HCH8g0950 641 Gene3D - 10 384 - -
HCH8g0950 641 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g0950 HCH-Chr8:45700451 HCH9g0659 HCH-Chr9:4384754 0.00E+00 dispersed
HCH8g0950 HCH-Chr8:45700451 HCH13g0471 HCH-Chr13:3261085 3.4e-313 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g0950 K03283 - csv:101215564 1129.39