Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH8g0990 | ATGTTGACAACAGTCATAGAAGCTTCTTCTTCACCACTTTGCTTCAACTTCTTCACCCATTCTCTTACCAATTCCAATTCCAAGCCAAGGCCCAGAATTTCAGTTTGCCGAGCTTCCTTATCCCTTCATAACAAGACCAGCACCACTAATTCCTGGAACCTTGGACTCTTTTCCAACAGTTCTGAGAGTTCAGTTTTTGATCCCTTGGGCATCCTGCCAGATTCTTCTACTGGATTAAATAATACATGGGAAAGTTTTCTTGGCTTATTTGGACAAACATTTGATAGTGCTTCAAGCACAAAAAAGGATAAGTCTTCGTCAGCACGGGGATTTGCAGCTGCAATTGAGGATAGTTCCATTGACATAGGGGACTTTTTCAAAGGTCCATTGCCTGGAAAATTTCTTCAGCTTTTGGGCTATTTAGCACTATCTAGGCTTGGAATCTATATACCTCTTGGTGGAGTGAACCGAGAGGCTTTCGCTGGCAACTTGGATCAGAACAGCTTATTGAGCACTTTAGATTCATTTTCTGGTGGAGGCATTGGTAGACTAGGGATATGCTCACTTGGCATTGTTCCCTTCATCAATGCACAAATTGTCTTCCAACTTCTTGCACAAGTTTATCCGAAGTTGCAAGAGCTTCAGAAAAGAGAAGGCGAAGCAGGGAGAAAGAAGATTCTCCAATATACTCGATATGCCTCAGTTGGGTTTGCAATTGTACAGGCAATTGGTCAAGTTCTCTATCTGCGGCCCTATGTTAATGATTTCAGTACAGAGTGGGTGCTCTCTTCTGTTATATTATTAACACTCGGCTCGGTCATAACAACATACATTGGAGAACGGATCTCGGACCTTAAGCTTGGAAATGGCACATCTCTTTTAATATTCACTAGCATTATCTCTTACTTACCAGCATCCTTTGGAAGGACAGCTACACAGGCTTTCCAGGATGGTAACTATGTTGGATTGATTGGAATACTAGTCTCCTTCTTTCTATTGGTACTTGGAATTGTATATGTTCAGGAAGCAGAAAGGAAAATCCCACTCAATTATGCTTCAAGATACACCAGCAAAGGTGGAGGGCTTCAGAAATCTGCTTACCTTCCCTTTAAGGTAAATAGTTCTGGTGTGATGCCAATCATTTTTTCTACATCGACATTAGCCCTTCCTGGTACTCTAGCGCGCTTTACAGGTTTATCCGTGCTAAAGAAGGCTGCAGTCGCTTTAAATCCAGGAGGTTCATTCTATCTGCCCACCAACATCCTTTTGATAGCCTTCTTCAACTATTACTACACATTCCTACAGTTGGACCCTGATGATGTGAGTGAGCAATTGAAGCGGCAGGGTGCATCGATTCCTCTTGTCCGTCCAGGCAAAAGTACTGCTTCATTTCTGAAAACGGTCCTAAGTCGGATATCGGTTCTTGGCTCAGCCTTCCTTGCATTTCTTGCTGCCGGCCCTGCAATCATTGAACAAACCACACATCTAACAGCATTTCGAGGATTTGCCGGAACATCTGTTCTTATTCTTGTTGGTTGTGCCACAGATACTGCCAGAAAAGTCCAAGCAGAGCTAATATCCCAGAAGTACAAGAACATAGAGTTTTATGATATTGACAAGTATAATCCATGA | 1632 | 42.52 | MLTTVIEASSSPLCFNFFTHSLTNSNSKPRPRISVCRASLSLHNKTSTTNSWNLGLFSNSSESSVFDPLGILPDSSTGLNNTWESFLGLFGQTFDSASSTKKDKSSSARGFAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFAGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVILLTLGSVITTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTATQAFQDGNYVGLIGILVSFFLLVLGIVYVQEAERKIPLNYASRYTSKGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASFLKTVLSRISVLGSAFLAFLAAGPAIIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAELISQKYKNIEFYDIDKYNP | 543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 45998289 | 46001445 | - | evm.model.ptg000008l.545 | HCH8g0990 | 550088 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH8g0990 | 543 | ProSitePatterns | Protein secY signature 2. | 277 | 294 | IPR030659 | - | |
HCH8g0990 | 543 | PANTHER | SECY/SEC61-ALPHA FAMILY MEMBER | 125 | 533 | IPR002208 | GO:0005048(PANTHER)|GO:0006616(PANTHER)|GO:0008320(PANTHER)|GO:0009535(PANTHER)|GO:0015031(InterPro)|GO:0016020(InterPro) | |
HCH8g0990 | 543 | SUPERFAMILY | Preprotein translocase SecY subunit | 126 | 525 | IPR023201 | - | |
HCH8g0990 | 543 | NCBIfam | preprotein translocase subunit SecY | 133 | 530 | IPR002208 | GO:0015031(InterPro)|GO:0016020(InterPro) | |
HCH8g0990 | 543 | Hamap | Protein translocase subunit SecY [secY]. | 122 | 534 | IPR026593 | - | |
HCH8g0990 | 543 | Pfam | SecY | 186 | 517 | IPR002208 | GO:0015031(InterPro)|GO:0016020(InterPro) | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 226 | 249 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 414 | 436 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 469 | 487 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 258 | 283 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 375 | 394 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 284 | 307 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 134 | 152 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 184 | 204 | - | - | |
HCH8g0990 | 543 | PRINTS | Preprotein translocase SecY subunit signature | 503 | 521 | - | - | |
HCH8g0990 | 543 | FunFam | Preprotein translocase subunit SECY, chloroplastic | 125 | 530 | - | - | |
HCH8g0990 | 543 | ProSitePatterns | Protein secY signature 1. | 185 | 204 | IPR030659 | - | |
HCH8g0990 | 543 | Gene3D | SecY subunit domain | 125 | 530 | IPR023201 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH8g0990 | K10956 | - | csv:101222431 | 932.169 |