Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1087 ATGAAGAAACTGTCTTTCATTCGATCAAGCTTTTGTATCTTTTTGTCAGCTTCCAACCCCTTCTTCTGGCAACTCTTCCATTTCTTGACCATCTCTCTCTTAGGTTTTATAGCTTTAAAAATCACAGATACAAGAACTTCTGTTTCCCCAAACAACCTTGATACTTTCTTCACTTCTGTCTCTGCCACCACTGTTTCTAGCATGTCTGTCGTACAAATGGAGGTTTTCTCTAATCTCCAACTTATCATTATCACCTTCTTGATGTTTCTTGGTGGTGAAGTCTTTGTTTCCTTTCTTGCTTTTCAACTTTCCCGCAGATTCTCAGTTACCAAACATCAACATTCAAGTATTGAAACTGGGAATGGGATAGCTATTGATATTAATGCTCCAATGGATCATCAAATTGATATGAAAACCAGATGTTTAAGGTCTCTTGGTCATGTGATTTTAGGTTATCTTTTGGGAGTCATTATTATTGGTTCAAGTTTTGTTTTTCTTTACATAACTATGACTCCCCATGCAAACCACCTACTCCAATCCAAAGGCCTGAAATTGCTGACTTTTTCCCTTTTTTCTACAGTTTCTACTTTTACAAATTGTGGGTTCATTCCCACCAATGAAAACATGATAGTTTTCAAGGGAAATTCAGGTCTTTTGCTTCTTTTTGTTTCACAAATTCTTATGGGTGGTTGTTTATATGCACCATGTCTAAGATTTGCGATATGGGTTATGGAGAAAGTGACTAAAAAGGAGGAATTCAGATATATTTTGAATCATTACTCAGAGATGGGTTACTCTCATTTGATGTCTGGTCTCCGGTGTCGATTTCTGGCCGTCACGGCGGTGGGATTCTTGGTTTTGCAGATGATAATCTTCTGTTCATTGGAATGGAAATCGGATCAAGGATTATGGGATGGTATGAATTCTTATCAGAAGTTGGTGGCTTCGTTGTTTCAAGTCACTAATTCCAGGCACAGCGGCGAATCTGTGGTGGATATATCGGTGATATCGCCGGCGATTCTCGTCGTCTTCGTCGTGATGATGTATCTTCCTCCATACACAACTTTCTATCCAAGAATGAATAAGGAAATGAATTCCATAAAAAAAGGGAAAGAGGGGGAAGGCAAAAGGCAGCCATTGATGAAATATGTAACATTCTCACAGCTCTCTTATTTAGCCATATTCATCACTCTCATATGTATCACTGAGAGACAAAAGCTCAAAGATGATCCCCTCAACTTCACTTTACTCAATATCACCATTGAAGTTATAAGTGCTTATGGTAATGTTGGCTTCTCAAGTGGGTATAGCTGTAAAAGACAACTAAAACCAGACAGCTCTTGTGAAGATGCATGGTATGGATTTTCAGGAAGATGGAGTGGGAAGGGAAAATTGATTCTCATTCTTGTCATGTTTTTTGGAAGACTCAAACAATTTAATATGCGAGGTGGAAGGGCTTGGAAGTTATCATAG 1473 38.42 MKKLSFIRSSFCIFLSASNPFFWQLFHFLTISLLGFIALKITDTRTSVSPNNLDTFFTSVSATTVSSMSVVQMEVFSNLQLIIITFLMFLGGEVFVSFLAFQLSRRFSVTKHQHSSIETGNGIAIDINAPMDHQIDMKTRCLRSLGHVILGYLLGVIIIGSSFVFLYITMTPHANHLLQSKGLKLLTFSLFSTVSTFTNCGFIPTNENMIVFKGNSGLLLLFVSQILMGGCLYAPCLRFAIWVMEKVTKKEEFRYILNHYSEMGYSHLMSGLRCRFLAVTAVGFLVLQMIIFCSLEWKSDQGLWDGMNSYQKLVASLFQVTNSRHSGESVVDISVISPAILVVFVVMMYLPPYTTFYPRMNKEMNSIKKGKEGEGKRQPLMKYVTFSQLSYLAIFITLICITERQKLKDDPLNFTLLNITIEVISAYGNVGFSSGYSCKRQLKPDSSCEDAWYGFSGRWSGKGKLILILVMFFGRLKQFNMRGGRAWKLS 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 46699517 46703170 + evm.model.ptg000008l.448 HCH8g1087 550185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1087 490 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 9 487 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
HCH8g1087 490 Pfam Cation transport protein 388 477 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
HCH8g1087 490 Pfam Cation transport protein 46 350 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g1086 HCH-Chr8:46684018 HCH8g1087 HCH-Chr8:46699517 4.30E-265 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1087 K24976 - csv:101206239 581.252