Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1140 ATGAGCGATTTCGAGAACGAAAGTTTGAAACTTGATACCAAATTTAAGCGCGATGCAGATTCCGAAGACTCCGTTGTGACTGTCAAGAAATTTAAAACGGAAGCCGCCACCGCCGCCGAGGTCATGAAGGTAAACGATGTCGAAGAAAATAGGATGTCCAGACGGGAAATTCAATTTGAAATTGAAGCGAATGCAGCAGAGGATAAAGGATCCAGGCACACCATGGAGGATGCTTTGGTTTTGCTTTTGGACGCGAGCTTGGATTTTCCCGGGAAATTGAGATGTGCGCATTTTGCTGTTTATGATGGACATGGAGGTCGATTAGCTGCTGAGTTTGCTCAAAAGCATTTGCATATGAATGTTCTTTCAGCCGGCTTACCACGTGAGTTGTTGGATGTAAAAGCAACTAAAAAAGCAATACTTGATGGTTTCCGGAGAACTGATGAATCTCTTCTTCAAGAAAGTGCCGCAGGGGGGTGGCAGGATGGTGCTACTGCTGTTTGCGTTTGGATATTAGGTCAAAGAGTTTTTGTTGCTAATGTTGGTGATGCAAAAGCTGTTGTAGCCCGGTGTTCGACGGCTGATAAATCATTGAATGATTCTATTGGTGGAAGCTCTTTAAAGGCTATTGTTTTGACAAGGGAACATAAAGCAATCTACCCACAGGAGAGAGCCCGCATACAAAAGGCTGGTGGTGTTGTCAGTTCAAATGGCCGACTACAGGGTCGCCTTGAAGTTTCTCGAGCATTTGGAGATCGCCAATTTAAAAAGTTAGGTGTTACTGCAACCCCAGATATTCATTCCTTTGAACTGACCGACAGGGAGCATTTTATCATTCTCGGGTGTGATGGATTATGGGGGGTTTTTGGACCTAATGATGCTGTTGATTTTGTTCAGAAATTATTGAAGGATGGCTTGCCTGTAACAACAGTAAGTCGACATCTTGTGAGGGAAGCTATTCGTGAGCGGCGATGTAAAGATAACTGTACAGCAATTGTCATTGTCTTCAGGCCCAAATGA 1020 44.02 MSDFENESLKLDTKFKRDADSEDSVVTVKKFKTEAATAAEVMKVNDVEENRMSRREIQFEIEANAAEDKGSRHTMEDALVLLLDASLDFPGKLRCAHFAVYDGHGGRLAAEFAQKHLHMNVLSAGLPRELLDVKATKKAILDGFRRTDESLLQESAAGGWQDGATAVCVWILGQRVFVANVGDAKAVVARCSTADKSLNDSIGGSSLKAIVLTREHKAIYPQERARIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKLGVTATPDIHSFELTDREHFIILGCDGLWGVFGPNDAVDFVQKLLKDGLPVTTVSRHLVREAIRERRCKDNCTAIVIVFRPK 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47043317 47048888 - evm.model.ptg000008l.395 HCH8g1140 550238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1140 339 ProSiteProfiles PPM-type phosphatase domain profile. 62 336 IPR001932 -
HCH8g1140 339 SMART PP2C_4 58 334 IPR001932 -
HCH8g1140 339 Gene3D - 43 337 IPR036457 -
HCH8g1140 339 CDD PP2Cc 63 336 IPR001932 -
HCH8g1140 339 PANTHER PROTEIN PHOSPHATASE 2C 52 336 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
HCH8g1140 339 Pfam Protein phosphatase 2C 68 324 IPR001932 -
HCH8g1140 339 SUPERFAMILY PP2C-like 59 337 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g1140 HCH-Chr8:47043317 HCH6g1641 HCH-Chr6:49424891 4.20E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1140 K17500 - csv:101216467 532.332