Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH8g1251 | ATGGCAATGGCTGTACCCGATTTGGTCCTCGTCGCCGGAACCCTAATTTTCTCCATCCTTCTCTTCCGCCTCTTCCTCCGCCGTCGAAATCAATCTCTCCGCCTCCCTCCTGGACCAAAACCCTGGCCAATCATTGGAAACTTGCCTCACATGGGCCAAGTGCCTCACCACTCCCTCGCCGCCATGGCCCGAAAGTACGGTCCCCTTCTATACCTAAAACTAGGCTACGTTAACGTCGTGGTGGCGGCGTCGGCCGCTGTGGCGGAACAGTTTTTGAAGTTTCAGGACGCGAATTTCTCGAGCCGGCCACCGAACGCCGGAGCAAAATATGTCGCTTATAATTATCAGGATTTGGTGTTTGCTCCGTACGGTCCACGGTGGCGGATGCTCCGGAAAATCAGCAACGTTCATTTGTTCTCGGCGAAGGCTCTTGATGATTATCGACGCGTTCGTGAGGAGGAGGTTGCAGTGCTGGTAAGAGCCCTTGCACGGGCAGGTCCGTCGCCGGTCAAGTTAGGAAGCTTGCTCAATGTGTGCGCCGCCAACGCCCTCGGGCGGGTGATGCTTGGACGTCGCGTCTTTGGAGATGGCCGTGGCGGGGATAGTGATCCAAAGGCGGACGAGTTTAAATCCATGGTGGTGGAACTTATGGTCCTGGCCGGAGAGTTTAGCGTCTGTGACTTTATTCCCGCGCTTGAGCGGTTTGATTTACAAGGCTTGGTGGGTAAGATGAAGAGGCTCCACAAACGGTTCGATGCGTTCTTGACCAAGATTGTGGAGGAGCACAAGATGATATCTGCCGCCGGCGGAGACGGTGACGGTGGTGGTGGCCGGCAGCACCAAGACTTGTTGAGCACGCTGCTGTCTTTGAGAGATCAAACGGAAGATGAGAATGAAAAGCTTAATGATACAGAAATCAAGGCCTTGTTGCTGAATATGTTCACAGCTGGGACCGACACAACATCAAGTACAGTAGAATGGGCCATAGCCGAACTCATCAAACACCCCAAAATCCTAGCCCAGGCCCAACAGGAACTTGACTCCATCGTCGGTCAAACCCGACCCGTATCGGATCTGGATCTTCCACAACTAACCTATCTCCAAGCCGTAGTTAAAGAAACATTCCGGCTCCACCCTTCCACGCCTCTCTCCCTCCCTCGGATCGCCTCCGAACCTTGCCAAATCAACGGCTACGATATCCCCAAAGGCTCCACTCTCCTCGTCAATGTCTGGGCCATCGCCCGTGACCCGAATCAATGGACCAGGCCGCTCGAATTCTTACCCGAGAGATTCTTACCCGGCGGTGAAAAGCCTCACGTCGATATTAAAGGAAATGATTTTGAGGTTATTCCGTTTGGGGCTGGACGGAGGATTTGTGCTGGAATGAGCCTAGGGTTACGGATGGTTCAGTTTTTAACGGCGACGTTGATTCATGCCTTTGATTGGGATTTGCCGACGGGAATTCCGATTCAGAATTTAAATATGGATGAGGCTTTTGGATTGACTTTGCAACGAGCTCAGCCGTTGGTTGTTCATCCACGGCTGCGATTGTCGACGTCGCTTTATTAG | 1569 | 53.03 | MAMAVPDLVLVAGTLIFSILLFRLFLRRRNQSLRLPPGPKPWPIIGNLPHMGQVPHHSLAAMARKYGPLLYLKLGYVNVVVAASAAVAEQFLKFQDANFSSRPPNAGAKYVAYNYQDLVFAPYGPRWRMLRKISNVHLFSAKALDDYRRVREEEVAVLVRALARAGPSPVKLGSLLNVCAANALGRVMLGRRVFGDGRGGDSDPKADEFKSMVVELMVLAGEFSVCDFIPALERFDLQGLVGKMKRLHKRFDAFLTKIVEEHKMISAAGGDGDGGGGRQHQDLLSTLLSLRDQTEDENEKLNDTEIKALLLNMFTAGTDTTSSTVEWAIAELIKHPKILAQAQQELDSIVGQTRPVSDLDLPQLTYLQAVVKETFRLHPSTPLSLPRIASEPCQINGYDIPKGSTLLVNVWAIARDPNQWTRPLEFLPERFLPGGEKPHVDIKGNDFEVIPFGAGRRICAGMSLGLRMVQFLTATLIHAFDWDLPTGIPIQNLNMDEAFGLTLQRAQPLVVHPRLRLSTSLY | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 47794809 | 47799257 | - | evm.model.ptg000008l.284 | HCH8g1251 | 550349 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH8g1251 | 522 | FunFam | Cytochrome P-450 19 | 25 | 514 | - | - | |
| HCH8g1251 | 522 | PANTHER | CYTOCHROME P450 98A9 | 10 | 522 | - | - | |
| HCH8g1251 | 522 | Gene3D | Cytochrome P450 | 21 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | SUPERFAMILY | Cytochrome P450 | 36 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | Pfam | Cytochrome P450 | 36 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | Coils | Coil | 284 | 307 | - | - | |
| HCH8g1251 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1251 | 522 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH5g0407 | HCH-Chr5:2685595 | HCH8g1251 | HCH-Chr8:47794809 | 6.80E-99 | dispersed | |
| HCH5g0408 | HCH-Chr5:2694681 | HCH8g1251 | HCH-Chr8:47794809 | 5.20E-96 | dispersed | |
| HCH5g0448 | HCH-Chr5:3017407 | HCH8g1251 | HCH-Chr8:47794809 | 2.30E-96 | dispersed | |
| HCH6g0069 | HCH-Chr6:837659 | HCH8g1251 | HCH-Chr8:47794809 | 8.10E-113 | dispersed | |
| HCH6g0070 | HCH-Chr6:854264 | HCH8g1251 | HCH-Chr8:47794809 | 1.00E-112 | dispersed | |
| HCH7g1713 | HCH-Chr7:48958200 | HCH8g1251 | HCH-Chr8:47794809 | 5.20E-102 | dispersed | |
| HCH8g1251 | HCH-Chr8:47794809 | HCH8g1433 | HCH-Chr8:48908128 | 2.50E-93 | dispersed | |
| HCH8g1251 | HCH-Chr8:47794809 | HCH9g1132 | HCH-Chr9:14652877 | 6.50E-102 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH8g1251 | K05280 | - | vvi:100232999 | 717.613 |