Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH8g1328 | ATGGTTTCCGCTGTACAACCGAAGAAGCGAGTCTTTGGTGTGTCAACTCTGGAGAAGACTGCTCACGATGACATTAGGAAACTTGCCTCAGCAGTGTATTTGCAAGTGAGCATTATTAGTCAGGCTCTCATATTTGTTACACGTTCTCGAAGTTGGTCTTTTGTGGAACGTCCCGGGTTATTACTCGTCGCAGCTTTTATGGTTGCTCAACTGATTGCTACCTTAATTGCTGTTTATGCAAATTGGAAATTTGCTGCCATTGAAGGGATTGGTTGGGGTTGGGCTGGAGTTATCTGGCTTTATAACATCATCTTTTACATCCCACTCGATCCCATAAAGTTCATTATACGATACGCTCTGAGTGGAAGAGCTTGGGATCTTGTCATCGAACAAAGGATTGCCTTTACAAGGCAAAAGGACTTTGGTAAAGAACAGAGAGAGCTACAATGGGCTCATGCTCAAAGAACACTACATGGGCTGCAAGCACCTGATGCCAAGATGTTCCATGACAGAACACATTTCACAGAGCTGAATCAGATGGCTGAAGAAGCCAAAAGGAGAGCTGAAATTGCACGGTTAAGGGAACTTCATACACTGAAAGGCCATGTTGAATCAGTGGTGAGGCTGAAAGGGCTTGATATTGACACAATTCAGCAAGCTTACACTGTTTGA | 672 | 43.9 | MVSAVQPKKRVFGVSTLEKTAHDDIRKLASAVYLQVSIISQALIFVTRSRSWSFVERPGLLLVAAFMVAQLIATLIAVYANWKFAAIEGIGWGWAGVIWLYNIIFYIPLDPIKFIIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFHDRTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 48235268 | 48236743 | - | evm.model.ptg000008l.207 | HCH8g1328 | 550426 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH8g1328 | 223 | Coils | Coil | 174 | 194 | - | - | |
HCH8g1328 | 223 | Gene3D | - | 2 | 119 | - | - | |
HCH8g1328 | 223 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 11 | 171 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
HCH8g1328 | 223 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 25 | 120 | IPR023298 | - | |
HCH8g1328 | 223 | Gene3D | - | 172 | 223 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH8g1326 | HCH-Chr8:48216710 | HCH8g1328 | HCH-Chr8:48235268 | 8.60E-116 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH8g1328 | K01535 | - | csv:101217264 | 403.29 |