Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1332 ATGGAAAAAACTGGATCTTTAACCAATAAATGGATTGCTACGACCGTAAGTATTTGGATCCAGTGCATCTGCGGTGCATCCTACACTTTCAGCATCTACTCTTCTCTTCTCAAATCCACCCAACATTACGATCAATCAACGCTTGACACCGTTTCCGTTTTCAAAGACATCGGAGCGAACGCCGGCGTTATTTCCGGCTTTCTTTACTCCGCCGTAACTTCCACCGTCCCCCGTCGTTGCTCTGCCAATCGGGTTATTTCCGGTCCATGGGTTGTGCACGTGGTCGGAGCCATTCAGTGCTTTGTTGGATATATTTTTATCTGGGCGGCTGTTTCCGGCGTCATTCATCGGCCGCCGGTGCCGGTGATGTGTTTTTTCATGTTCTTGGCGGCGCATTCGCAGACCTTTTTTAATACAGCGAATGTTGTTACTGGTGTTCATAATTTTGCGAATTATAGTGGAACAATTGTCGGTATCTTAAAGGGGTTTCTTGGTCTTAGTGGAGCATTACTAATCCAAGTTTATAACACAATATGCAAGAGTGAACCAAGCAATTATCTTCTCACACTGGCTGTGTTGCCCACATTTCTGTCCCTTTTGCTTATGTGGTTTGTTAGAATTGACAAAAATGTGACTGGTAATGAGATGAAGCATTTGAATTCTTTGTCTGCACTAGCTGTGATTACTGCTTTTTATCTCATGATTCTGATTATTTTGGAGAACATTTTCTCCCTTTCATTGTGGACTCGTTTCTTCACGTTCTCGACACTCTTGATTCTACTCGCTTCTCCTCTCGGCATTGCAATTAATGCTCGGAGGGAGGATTCCGATAATGCTAATCCAGTGGCATCCTTAAGGCTTCATCATTCCGACTCGGATGATTCTCTCGGATATCTTGAATTGCCAGGTGATGAGAGTCAGCCAATGGTTATTACAAATTCCACAACATCTCAAGATGCAGAAGGTATGACTATGAATGTCCTGGAAGCGATACGTACTGTAAATTTCTGGCTGTTGTTTTTGGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGTCAACTTGGGCAATCTCTTGGTTATAAAGCAATTGAGATAAAGACTTTTGTTTCTCTATGGAGTATATGGAACTTTCTCGGACGATTCGGAGCTGGTTATACATCGGATTATCTCCTCCACACGTCGGGATGGGCAAGACCATTGTTCATGGCAATTACTCTGTTGATAATGAGTGTTGGACACATTGTGATTGCCTCTGGTTTCTCTGGAAATTTGTATGTGGGTTCAATTCTAGTTGGCATATGTTATGGTTCACAATGGTCACTAATGCCTACAATCACTTCAGAGATATTTGGTATAGAGCATATGGGGACCATTTTCAACACCATAGCTATAGCCAGTCCATTGGGGTCTTATATTTTCTCTGTTAGAATTATTGGTTACATATATGACAAAGAAGCTACTGGTGAACATAACTCTTGCTCAGGCACTCACTGCTTTGTGATATCTTTTCTGGTCATGGCAGCTGTCTCTTTCTTTGGTTTTCTTGTTGCTATTGCTCTGTTCCTTAGAACTAAGAGGTTCTACAAACTGGCTATGCAAAAGAGGATCAGTTGA 1632 42.4 MEKTGSLTNKWIATTVSIWIQCICGASYTFSIYSSLLKSTQHYDQSTLDTVSVFKDIGANAGVISGFLYSAVTSTVPRRCSANRVISGPWVVHVVGAIQCFVGYIFIWAAVSGVIHRPPVPVMCFFMFLAAHSQTFFNTANVVTGVHNFANYSGTIVGILKGFLGLSGALLIQVYNTICKSEPSNYLLTLAVLPTFLSLLLMWFVRIDKNVTGNEMKHLNSLSALAVITAFYLMILIILENIFSLSLWTRFFTFSTLLILLASPLGIAINARREDSDNANPVASLRLHHSDSDDSLGYLELPGDESQPMVITNSTTSQDAEGMTMNVLEAIRTVNFWLLFLAMVCGMGSGLATINNMSQLGQSLGYKAIEIKTFVSLWSIWNFLGRFGAGYTSDYLLHTSGWARPLFMAITLLIMSVGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGIEHMGTIFNTIAIASPLGSYIFSVRIIGYIYDKEATGEHNSCSGTHCFVISFLVMAAVSFFGFLVAIALFLRTKRFYKLAMQKRIS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48265645 48267625 + evm.model.ptg000008l.203 HCH8g1332 550430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1332 543 Pfam Major Facilitator Superfamily 339 532 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
HCH8g1332 543 SUPERFAMILY MFS general substrate transporter 223 534 IPR036259 -
HCH8g1332 543 Gene3D MFS general substrate transporter like domains 326 537 IPR036259 -
HCH8g1332 543 CDD MFS_Mch1p_like 10 519 - -
HCH8g1332 543 Pfam Nodulin-like 10 268 IPR010658 -
HCH8g1332 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 535 - GO:0016020(PANTHER)
HCH8g1332 543 SUPERFAMILY MFS general substrate transporter 7 207 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0823 HCH-Chr7:16794824 HCH8g1332 HCH-Chr8:48265645 7.00E-89 dispersed
HCH7g0824 HCH-Chr7:16840525 HCH8g1332 HCH-Chr8:48265645 8.80E-92 dispersed
HCH8g1332 HCH-Chr8:48265645 HCH8g1335 HCH-Chr8:48278304 2.10E-212 dispersed
HCH8g1332 HCH-Chr8:48265645 HCH8g1333 HCH-Chr8:48268150 6.60E-206 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1332 - - - 0.0