Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1358 ATGACTTCCCTTTATCTCCCTCTATCTCTTCTCTTCCTTTCCCTTTTCTCTCTCTCCTTTCCCTTCTCTGTCGAATCCAAACTCCACGTTAATTACTACCAAAAAACTTGCCCTAATTTCGCTCAAACCGTCAAGGAAACCGTCGCTGCTAAACAAACCGCAAGCCCGACCACCGCCGCGGGCACTCTCCGTCTCTTCTTCCACGACTGCATGGTTGAGGGATGCGACGCTTCAATCCTTATCTCCTCCAATACATTCAACCACGCCGAGCGTGACGCCGATATCAACCTCTCCCTTCCTGGCGATGCTTTCGACGTTATCGTTAGGGCGAAAACCGCTTTGGAATTATCTTGCCCCGGGATTGTGTCGTGCTCCGATATCATGGCTCAGGCGACGCGTGATCTCGTTTCAATGGTCGGAGGACCGTTTTACGACGTCCGATTAGGGAGAAAAGACGGTCTTCTATCGAAATCGTCGCGAGTGGAAGGGAATATCCCGAAACCGATGCAGACCGTGGATGAAATGATTAAGGTTTACGCCGGTAGAGGCTTCACGGTTCAAGAAATGGTGGCGCTTTCCGGCGGTCGCACGATCGGATTCTCGCATTGTAAGGAATTCAGTGATCGTATTTTCAATTATAGCAAAACGAAGCCAACGGATCCAGAGATTCATCCGAAGTACGCGGAAGCATTGAAGAAGATGTGTAAGGATTACGCGACAAATCCGGCGATGTCGGCGTTTAACGACGCGATGACGCCGGGGAAGTTTGATAACATGTATTATCAGAATTTGCTGAAAGGATTAGGGCTTCTATCGTCGGATCATGCGTTGGTGAAAGATCCGAGAACGAGGCCGTTTGTGGAGAAGTACGCCGGCGATCAAGCGGCGTTTTTTAGGGATTTCGCGCGTGCGATGGAGAAGTTGAGTGTTTATGGAGTGAAAGTTGGTCGGAAAGGAGAAGTCAGAAGGAAGTGCGATGTCTTCAATTCAATCAAGACTTGA 1002 49.4 MTSLYLPLSLLFLSLFSLSFPFSVESKLHVNYYQKTCPNFAQTVKETVAAKQTASPTTAAGTLRLFFHDCMVEGCDASILISSNTFNHAERDADINLSLPGDAFDVIVRAKTALELSCPGIVSCSDIMAQATRDLVSMVGGPFYDVRLGRKDGLLSKSSRVEGNIPKPMQTVDEMIKVYAGRGFTVQEMVALSGGRTIGFSHCKEFSDRIFNYSKTKPTDPEIHPKYAEALKKMCKDYATNPAMSAFNDAMTPGKFDNMYYQNLLKGLGLLSSDHALVKDPRTRPFVEKYAGDQAAFFRDFARAMEKLSVYGVKVGRKGEVRRKCDVFNSIKT 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48399689 48400690 - evm.model.ptg000008l.177 HCH8g1358 550456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1358 333 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH8g1358 333 FunFam Peroxidase 31 177 - -
HCH8g1358 333 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
HCH8g1358 333 Gene3D - 31 329 - -
HCH8g1358 333 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 Gene3D Peroxidase, domain 2 166 308 - -
HCH8g1358 333 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 Pfam Peroxidase 44 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 PANTHER - 14 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH8g1358 333 FunFam Peroxidase 166 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH3g0684 HCH-Chr3:4827869 HCH8g1358 HCH-Chr8:48399689 9.10E-71 dispersed
HCH3g1284 HCH-Chr3:48757963 HCH8g1358 HCH-Chr8:48399689 5.20E-15 dispersed
HCH8g1358 HCH-Chr8:48399689 HCH14g0031 HCH-Chr14:3070299 1.50E-59 dispersed
HCH14g0352 HCH-Chr14:32436022 HCH8g1358 HCH-Chr8:48399689 7.10E-78 transposed
HCH13g0794 HCH-Chr13:7615056 HCH8g1358 HCH-Chr8:48399689 1.90E-107 wgd
HCH3g0311 HCH-Chr3:1968209 HCH8g1358 HCH-Chr8:48399689 1.20E-138 wgd
HCH8g1358 HCH-Chr8:48399689 HCH9g0176 HCH-Chr9:1044251 1.10E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1358 K00430 - mdm:114825404 477.248