Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1421 ATGAAACAATCTCTACTACTTCTCCTTCATTTCCATCTTTTCTTCATCATCCCTTCTTATTCCATCGATTTCCTCTTCAATTCCTTCTCCAACTCTTCCAATGGCACAGACATAATCCTCATCAACGATGCAAGGTTCGATTCCTCAGTCATTCGTCTCATCAACGCCTCCAATCAGCTCTCTTTAGGCCGAGCTTTTTACCACAAGAAGCTTCCCATGAGACCCACTTCGAATTCCAGTGGAAAAATCTCATCTTTTTCCACTTCTTTCGTCTTTTCAATCTTACCAGAGATTGATTCAAGTCCAGGTTTTGGTTTAGCTTTTGTTCTTTCTAATTGGACTTCTCCTCCTGATGCTTTAGCCAGTCAATATTTTGGTCTTTTCACGAACGCTACAACTCCTACAGTAGCTCCACTTCTTGCTGTGGAATTTGATACGGGTACTAACCCTGAGTTTAATGACCCCAATGGGAATCATATTGGGATTGATTTGAATAATGTGGAATCTAGAGTTACTCAATCAGCTGGTTATTTTGATGATTCTAATGGTGGGTTTGTTCCAGTTCCTATGAGGAATGGTCAGAACATTCGTGCTTGGATTGAATTTGATGGTTCTAACTTTGAAATCAATGTTACTGTTGCTCCTGTCGGGTTGCCTCGCCCGTCGAGGTCCACGTTGAGTTTTCGAGACCCCGTTATTGCGAATTATGTATCGAGTGAGATGTTTGTTGGGTTTTCGGCGTCTATGACGAATTGGGTTGAGGAGAGGAGGGTTTTGGCTTGGAGTTTTAGTGATGTTGGGGTTGCTAGAGAGATTAATACGACGAATTTCCCGGTGTTCAGGCCGGAGGCTGAGGGGGGGACGTTGTCTTCGGGAGGTGTTTTAGGGATTGTAATTGGATGTGTGGTGTTTGTGATTGGTATTGCATTTGGGGGGTTATGGTTTTGGAGGAGAAATAGATTGAGAGAAGATCATGATGAAGAAATTGAGGATTGGGAGCTTGAGTATTGGCCTCATAGATTCTCCTATGAAGAGCTTAGTAAGGCCACTGATGGCTTTTCCAATAATCATCTCCTTGGTGCAGGTGGATTTGGGAAAGTTTATAAAGGCACTTTACCCAATAATTCAGAAATTGCAGTCAAGTGTGTGAATCATGATTCAAAACAAGGGTTGAAGGAGTTTATGGCTGAAATCTCAAGTATGGGCAGGCTTCAACATAAAAATTTGGTTCAAATGCGAGGTTGGTGTAGGAAAGGCAATGAGTTATTGCTAGTTTATGATTACATGCCCAATGGGAGCCTCAACCGATGGATATTCGATAAACCGGCGACGATACTAGGTTGGCAACAACGTCGCTGTGTCCTTACCGATGTTGCAGAAGGACTAAACTACCTACATCACGGTTGGGATCAAGTAGTGATCCATCGAGACATAAAGTCGAGCAATGTGTTGTTAGATTCGGATATGAGAGGTAGAGTCGGTGATTTTGGACTTGCTAAATTGTACCAACACGGGGAAACTCCGAATACCACTCGTGTTGTTGGAACTTTGGGTTACTTGGCACCCGAGATTGCTACGGTGGCTACACCGACGGCAGCTAGCGATGTGTATAGCTTTGGGGTGGTGATTCTTGAAGTGGCGTGCGGACGAAGGCCGATAGAGATGGCAGTGGAAGAAGATAAGACAGTGCTTATTGATTGGGTGAGAGATCTTTATGCGTGCGGAAGGCTGATAGAGGCGGCGGATGCTAGGATTAGAGAAGAGTATGAAGTGGAAGAGATGGAGATGACATTGAAGCTTGGTTTGGCTTGTTGTCATCCTGACCCTGAACGTAGGCCTTCCATGAAGGAGGTAACGTCAGTCCTAATTGGAGATCATACGGCGCCGGCGCCGGCGGAGTTGTTATCGGGACCGGGCCATGGTGGAATAGCACCACCGTTGACAGGGGAAGCATGA 1956 44.89 MKQSLLLLLHFHLFFIIPSYSIDFLFNSFSNSSNGTDIILINDARFDSSVIRLINASNQLSLGRAFYHKKLPMRPTSNSSGKISSFSTSFVFSILPEIDSSPGFGLAFVLSNWTSPPDALASQYFGLFTNATTPTVAPLLAVEFDTGTNPEFNDPNGNHIGIDLNNVESRVTQSAGYFDDSNGGFVPVPMRNGQNIRAWIEFDGSNFEINVTVAPVGLPRPSRSTLSFRDPVIANYVSSEMFVGFSASMTNWVEERRVLAWSFSDVGVAREINTTNFPVFRPEAEGGTLSSGGVLGIVIGCVVFVIGIAFGGLWFWRRNRLREDHDEEIEDWELEYWPHRFSYEELSKATDGFSNNHLLGAGGFGKVYKGTLPNNSEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNELLLVYDYMPNGSLNRWIFDKPATILGWQQRRCVLTDVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSDMRGRVGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSFGVVILEVACGRRPIEMAVEEDKTVLIDWVRDLYACGRLIEAADARIREEYEVEEMEMTLKLGLACCHPDPERRPSMKEVTSVLIGDHTAPAPAELLSGPGHGGIAPPLTGEA 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48843406 48845361 - evm.model.ptg000008l.114 HCH8g1421 550519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1421 651 Pfam Protein kinase domain 354 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g1421 651 SUPERFAMILY Protein kinase-like (PK-like) 329 622 IPR011009 -
HCH8g1421 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 267 IPR013320 -
HCH8g1421 651 CDD STKc_IRAK 359 622 - -
HCH8g1421 651 Gene3D - 20 278 - -
HCH8g1421 651 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524(InterPro)
HCH8g1421 651 Pfam Legume lectin domain 22 276 IPR001220 GO:0030246(InterPro)
HCH8g1421 651 ProSitePatterns Legume lectins beta-chain signature. 140 146 IPR019825 -
HCH8g1421 651 FunFam L-type lectin-domain containing receptor kinase S.4 429 634 - -
HCH8g1421 651 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
HCH8g1421 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH8g1421 651 FunFam L-type lectin-domain containing receptor kinase S.1 338 428 - -
HCH8g1421 651 FunFam L-type lectin-domain containing receptor kinase S.4 20 271 - -
HCH8g1421 651 SMART serkin_6 353 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g1421 651 PANTHER - 43 626 IPR050528 GO:0005886(PANTHER)
HCH8g1421 651 CDD lectin_legume_LecRK_Arcelin_ConA 22 264 IPR001220 GO:0030246(InterPro)
HCH8g1421 651 ProSiteProfiles Protein kinase domain profile. 353 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH8g1421 651 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH8g1421 HCH-Chr8:48843406 HCH9g0691 HCH-Chr9:4607767 4.60E-137 dispersed
HCH8g1421 HCH-Chr8:48843406 HCH9g0690 HCH-Chr9:4598386 1.90E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81734 PF00069 Pkinase 1.30E-51 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1421 - - - 0.0