Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1432 ATGGAGTCTCTCCAGCAACTATTATTTCATCCAATTTCTTCAACTTTTTTCATCATCTTCTTCATCTTCCTTCTCCTTAAACTCTTCTCTTTCAGACAAAACTCTTCAAAAAACTTACCTCCTTCTCCACCAAAGCTTCCGGTCTTCGGAAACTTACTAAACCTCGGTTTATATCCCCATATCACCCTTCAAACTTATGCTCAACGACATGGCCCTCTCTTCCTCGTTCACTTTGGCTCTGTCCCAATTCTCATCGTCTCTTCCGCTGATACCGCTCGGGACATCATGAAAACTCACGACCTCGTTTTCTCCAACCGTCCTAAATCAAGCATGGGCGAAAGGCTTCTTTACGATTCCAGAGATATAGCTGCTTCTCCCTATGGCGAATATTGGAGACAAATGAGAAGTGTTGGTGTTCTTCATCTCTTAAGTAACAAAAGGGTTCAATCCTTTAGTTCTGTTAGAGAAGAAGAAGTCAAACTCGTGATTAAGAGGATTAAGGAGAATCCTTTGTCTGTGAATTTGAGTGAAATGTTTTCTGGTATAACGAATGATGTTGTTTGTAGAGTTGCGTTTGGGAGAAAATATGGTAGGGGAGAAGATGGGAAAAGGTTTCAAAAACTTTTGCGGGAGTTTGGAGAATTGTTGGGAACTTTTACTTTGAGAGATTTCATCCCATGGTTGGGTTGGATTGATCGTATCACTGGTTTGGATGCTAAAATAGAAAGGGTTGCTAAAGAGTTTGATGTTTTTTTAGATAAGGTGATTGAAGAACATGTGGATTCTAAGAAGAGCGGAGAAAATGAGAAGGAACAGAAGGATCTTGTTGATGTTTTGCTTTGGATTCAAAGAGAAAACTTGCTTGGTTTTCCACTTGATACGGTTAGCATCAAAGCTGTAATTTTGGACATGTTTGCTGCAGGGACAGACACAACATACACAGTGATGGAATGGGCAATGACAAGACTATTAAAGCATCCAAGAGTGATGAAGAAATTACAGTCCGAGGTCAGAGAAATAGCAGCTGATAAGACATACGTGACAGAAGAAGACATAGAAAAAATGCACTATTTGAAAGCAGTAATCAAAGAAACATTGCGGCTACATCCACCAATTCCACTATTGGTACCAAGGGAATCAACTCAAGATATTAAATTAAAGGGATATGATATTAAAGCAGAAACTAGAGTGATTATCAATGCATGGGCCATTGGAAGAGACCCAAAATGGTGGGAAGAAGCAGAAGAATTCAAACCAGAAAGGTTTATGAATAATGGGATTGATTACAAGGGACATGATTTTCAATTGATACCATTTGGAGCAGGAAGAAGAGGGTGTCCTGGGATTGTGTTTGCTACAGTAATTAATGAAGTTGTTTTGGCAAATCTGGTGCTTAATTTTGAATGGTCATTGGGAGATGGAGTTAAACCTGAGGATTTGGATATGACAGGAATTTCTGGTTTAACTATTCATAGGAAATTTCCTCTTCAAGCAGTGGCTAATCCTATTATTCCTACGAGTTGTTGTAATTAG 1533 39.01 MESLQQLLFHPISSTFFIIFFIFLLLKLFSFRQNSSKNLPPSPPKLPVFGNLLNLGLYPHITLQTYAQRHGPLFLVHFGSVPILIVSSADTARDIMKTHDLVFSNRPKSSMGERLLYDSRDIAASPYGEYWRQMRSVGVLHLLSNKRVQSFSSVREEEVKLVIKRIKENPLSVNLSEMFSGITNDVVCRVAFGRKYGRGEDGKRFQKLLREFGELLGTFTLRDFIPWLGWIDRITGLDAKIERVAKEFDVFLDKVIEEHVDSKKSGENEKEQKDLVDVLLWIQRENLLGFPLDTVSIKAVILDMFAAGTDTTYTVMEWAMTRLLKHPRVMKKLQSEVREIAADKTYVTEEDIEKMHYLKAVIKETLRLHPPIPLLVPRESTQDIKLKGYDIKAETRVIINAWAIGRDPKWWEEAEEFKPERFMNNGIDYKGHDFQLIPFGAGRRGCPGIVFATVINEVVLANLVLNFEWSLGDGVKPEDLDMTGISGLTIHRKFPLQAVANPIIPTSCCN 510
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 48903513 48905228 + evm.model.ptg000008l.103 HCH8g1432 550530
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1432 510 Pfam Cytochrome P450 40 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 SUPERFAMILY Cytochrome P450 40 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PANTHER CYTOCHROME P450 71B11-RELATED 15 500 IPR050193 -
HCH8g1432 510 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 FunFam Cytochrome P450 83B1 27 499 - -
HCH8g1432 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH8g1432 510 CDD CYP71-like 69 496 - -
HCH8g1432 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1432 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH3g0384 HCH-Chr3:2486947 HCH8g1432 HCH-Chr8:48903513 7.40E-130 dispersed
HCH3g0386 HCH-Chr3:2503108 HCH8g1432 HCH-Chr8:48903513 4.90E-87 dispersed
HCH3g1169 HCH-Chr3:41681208 HCH8g1432 HCH-Chr8:48903513 5.60E-122 dispersed
HCH8g1432 HCH-Chr8:48903513 HCH8g1434 HCH-Chr8:48916939 1.50E-167 dispersed
HCH8g1432 HCH-Chr8:48903513 HCH8g1433 HCH-Chr8:48908128 4.50E-241 tandem
HCH12g0664 HCH-Chr12:4048622 HCH8g1432 HCH-Chr8:48903513 1.70E-41 transposed
HCH13g1041 HCH-Chr13:31050595 HCH8g1432 HCH-Chr8:48903513 4.10E-120 transposed
HCH7g1713 HCH-Chr7:48958200 HCH8g1432 HCH-Chr8:48903513 3.20E-91 transposed
HCH9g1264 HCH-Chr9:36129205 HCH8g1432 HCH-Chr8:48903513 3.40E-79 transposed
HCH1g1093 HCH-Chr1:58613469 HCH8g1432 HCH-Chr8:48903513 5.20E-100 wgd
HCH3g0380 HCH-Chr3:2401957 HCH8g1432 HCH-Chr8:48903513 1.10E-125 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1432 - - - 0.0