Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH8g1432 | ATGGAGTCTCTCCAGCAACTATTATTTCATCCAATTTCTTCAACTTTTTTCATCATCTTCTTCATCTTCCTTCTCCTTAAACTCTTCTCTTTCAGACAAAACTCTTCAAAAAACTTACCTCCTTCTCCACCAAAGCTTCCGGTCTTCGGAAACTTACTAAACCTCGGTTTATATCCCCATATCACCCTTCAAACTTATGCTCAACGACATGGCCCTCTCTTCCTCGTTCACTTTGGCTCTGTCCCAATTCTCATCGTCTCTTCCGCTGATACCGCTCGGGACATCATGAAAACTCACGACCTCGTTTTCTCCAACCGTCCTAAATCAAGCATGGGCGAAAGGCTTCTTTACGATTCCAGAGATATAGCTGCTTCTCCCTATGGCGAATATTGGAGACAAATGAGAAGTGTTGGTGTTCTTCATCTCTTAAGTAACAAAAGGGTTCAATCCTTTAGTTCTGTTAGAGAAGAAGAAGTCAAACTCGTGATTAAGAGGATTAAGGAGAATCCTTTGTCTGTGAATTTGAGTGAAATGTTTTCTGGTATAACGAATGATGTTGTTTGTAGAGTTGCGTTTGGGAGAAAATATGGTAGGGGAGAAGATGGGAAAAGGTTTCAAAAACTTTTGCGGGAGTTTGGAGAATTGTTGGGAACTTTTACTTTGAGAGATTTCATCCCATGGTTGGGTTGGATTGATCGTATCACTGGTTTGGATGCTAAAATAGAAAGGGTTGCTAAAGAGTTTGATGTTTTTTTAGATAAGGTGATTGAAGAACATGTGGATTCTAAGAAGAGCGGAGAAAATGAGAAGGAACAGAAGGATCTTGTTGATGTTTTGCTTTGGATTCAAAGAGAAAACTTGCTTGGTTTTCCACTTGATACGGTTAGCATCAAAGCTGTAATTTTGGACATGTTTGCTGCAGGGACAGACACAACATACACAGTGATGGAATGGGCAATGACAAGACTATTAAAGCATCCAAGAGTGATGAAGAAATTACAGTCCGAGGTCAGAGAAATAGCAGCTGATAAGACATACGTGACAGAAGAAGACATAGAAAAAATGCACTATTTGAAAGCAGTAATCAAAGAAACATTGCGGCTACATCCACCAATTCCACTATTGGTACCAAGGGAATCAACTCAAGATATTAAATTAAAGGGATATGATATTAAAGCAGAAACTAGAGTGATTATCAATGCATGGGCCATTGGAAGAGACCCAAAATGGTGGGAAGAAGCAGAAGAATTCAAACCAGAAAGGTTTATGAATAATGGGATTGATTACAAGGGACATGATTTTCAATTGATACCATTTGGAGCAGGAAGAAGAGGGTGTCCTGGGATTGTGTTTGCTACAGTAATTAATGAAGTTGTTTTGGCAAATCTGGTGCTTAATTTTGAATGGTCATTGGGAGATGGAGTTAAACCTGAGGATTTGGATATGACAGGAATTTCTGGTTTAACTATTCATAGGAAATTTCCTCTTCAAGCAGTGGCTAATCCTATTATTCCTACGAGTTGTTGTAATTAG | 1533 | 39.01 | MESLQQLLFHPISSTFFIIFFIFLLLKLFSFRQNSSKNLPPSPPKLPVFGNLLNLGLYPHITLQTYAQRHGPLFLVHFGSVPILIVSSADTARDIMKTHDLVFSNRPKSSMGERLLYDSRDIAASPYGEYWRQMRSVGVLHLLSNKRVQSFSSVREEEVKLVIKRIKENPLSVNLSEMFSGITNDVVCRVAFGRKYGRGEDGKRFQKLLREFGELLGTFTLRDFIPWLGWIDRITGLDAKIERVAKEFDVFLDKVIEEHVDSKKSGENEKEQKDLVDVLLWIQRENLLGFPLDTVSIKAVILDMFAAGTDTTYTVMEWAMTRLLKHPRVMKKLQSEVREIAADKTYVTEEDIEKMHYLKAVIKETLRLHPPIPLLVPRESTQDIKLKGYDIKAETRVIINAWAIGRDPKWWEEAEEFKPERFMNNGIDYKGHDFQLIPFGAGRRGCPGIVFATVINEVVLANLVLNFEWSLGDGVKPEDLDMTGISGLTIHRKFPLQAVANPIIPTSCCN | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 48903513 | 48905228 | + | evm.model.ptg000008l.103 | HCH8g1432 | 550530 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH8g1432 | 510 | Pfam | Cytochrome P450 | 40 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | SUPERFAMILY | Cytochrome P450 | 40 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PANTHER | CYTOCHROME P450 71B11-RELATED | 15 | 500 | IPR050193 | - | |
| HCH8g1432 | 510 | Gene3D | Cytochrome P450 | 25 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | FunFam | Cytochrome P450 83B1 | 27 | 499 | - | - | |
| HCH8g1432 | 510 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH8g1432 | 510 | CDD | CYP71-like | 69 | 496 | - | - | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 91 | 112 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 296 | 313 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 316 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1432 | 510 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH3g0384 | HCH-Chr3:2486947 | HCH8g1432 | HCH-Chr8:48903513 | 7.40E-130 | dispersed | |
| HCH3g0386 | HCH-Chr3:2503108 | HCH8g1432 | HCH-Chr8:48903513 | 4.90E-87 | dispersed | |
| HCH3g1169 | HCH-Chr3:41681208 | HCH8g1432 | HCH-Chr8:48903513 | 5.60E-122 | dispersed | |
| HCH8g1432 | HCH-Chr8:48903513 | HCH8g1434 | HCH-Chr8:48916939 | 1.50E-167 | dispersed | |
| HCH8g1432 | HCH-Chr8:48903513 | HCH8g1433 | HCH-Chr8:48908128 | 4.50E-241 | tandem | |
| HCH12g0664 | HCH-Chr12:4048622 | HCH8g1432 | HCH-Chr8:48903513 | 1.70E-41 | transposed | |
| HCH13g1041 | HCH-Chr13:31050595 | HCH8g1432 | HCH-Chr8:48903513 | 4.10E-120 | transposed | |
| HCH7g1713 | HCH-Chr7:48958200 | HCH8g1432 | HCH-Chr8:48903513 | 3.20E-91 | transposed | |
| HCH9g1264 | HCH-Chr9:36129205 | HCH8g1432 | HCH-Chr8:48903513 | 3.40E-79 | transposed | |
| HCH1g1093 | HCH-Chr1:58613469 | HCH8g1432 | HCH-Chr8:48903513 | 5.20E-100 | wgd | |
| HCH3g0380 | HCH-Chr3:2401957 | HCH8g1432 | HCH-Chr8:48903513 | 1.10E-125 | wgd |
Pathway information