Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH8g1433 | ATGGATTCTCTACTTTTTCTTCTTCTGCAACTATTATATCATCCATTAACTCTTTCCATCTTCTTAATCTTCATCTTCCTTCTCTTTAAACACTTTCTTTTCCTTTCAAACCCTTCAAAAACCTTACTTCCTTCTCCACCAAAGCTTCCAATCTTTGGAAACTTACTAAACCTTGGTTCATATCCCCATATTACCCTTCAAACTTATGCTCAACGACATGGCTCTCTTTTCCTCGTTCACTTTGGCTCTGTCCCCATCATCGTTGTCTCTTCCGCTGATATTGCTCTTGACATCATGAAAACTCACGACCTCGTTTTCTCCGACCGTCCCAAATCCAGCCTCAGCGATAAGCTTCTTTACAACTCGAGAGTTATTGCAACTTCTGCATATGGTGAATATTGGAGGCAGATGAAAAGCATTGCTGTGGTTCATCTTTTAAGTAACAGGAGGGTGCAATCCTTTCGATCTGTTAGAGAAGAAGAAATCAAACTCATGATTCAGAAGATTAGAGAGAATCCATTGCGTGTGAATTTGAGTGAAATGTTTTCTGGAGTAACGAATGATGTTGTTTGTAGGGTTGCGGTAGGGAGAAAATATGGTGAGGGAGAAGATGAGAAAGGGTTTAGAAATCTTTTGATGGAGTTAATGAAATTGTTGGGAACTTTTACTTTGAGAGATTTTATCCCATTATTGGGATGGATTGATTATATCACTGGTTTGGATGCTAAAATAGAAAGGGTTGCTAAAGAGTTTGATGCTTTTTTAGAAAAGGTTATAAAAGAACATATGGATTTCAAGAAGAGAGGAGAAGATGAGGAACAGAAGGATCTTGTTGATATTCTGCTTTGGTTGCAGAGAGAAAACTTGGCTGGTTTTCCCCTTGAGATGGTTAACATCAAGGCTATACTTTTGGACGTGTTTGCAGCAGGGATAGACACGACATACACAGTGATGGAATGGGCTATGACAAGACTTTTAAAACATCCAAGAGTGATGAAGAAATTACAGTCCGAGGTTAGAGAAATAGCAGCTGACAAAACATACGTGTCAGAAGAAGACATAGAAAAAATGCATTATTTGAAAGCAGTAATCAAAGAAACATTGCGGCTACATCCACCAATTCCACTATTGGTACCAAGGGAATCAACTCAAGATATTAAATTAAAGGGATATGATATCAAAGGAGGAAGTAGAATTATGATCAATGCATGGGCCATTGGGAGAGACCCAAAATGGTGGGAAGAAGCAGAAGAATTCAGACCAGAAAGGTTTATGAATAATGGGATTGATTACAAGGGACATGATTTTCAATTGATACCATTTGGAGCAGGGAGAAGAGGGTGTCCTGGGATTGTGTTTGCTACTGCAATAAATGAAGTTGTTTTGGCAAATGTGGTGCTTAATTTTGAATGGTCATTGGGAGATGGAGTTAAGCCTGAGGACTTGGATATGACTCAAGTGTTTGCCTTAGCCATTCATAGAAAATTTCCTCTCGTAGCAGTCGCTAACTCCTACTCCCCGCCGTCCCGAAAAAAATCGGGCGTTTACGAAGAAAAGGGATCAGTGCCACTGCCACCCATGTTACGTTAA | 1590 | 39.5 | MDSLLFLLLQLLYHPLTLSIFLIFIFLLFKHFLFLSNPSKTLLPSPPKLPIFGNLLNLGSYPHITLQTYAQRHGSLFLVHFGSVPIIVVSSADIALDIMKTHDLVFSDRPKSSLSDKLLYNSRVIATSAYGEYWRQMKSIAVVHLLSNRRVQSFRSVREEEIKLMIQKIRENPLRVNLSEMFSGVTNDVVCRVAVGRKYGEGEDEKGFRNLLMELMKLLGTFTLRDFIPLLGWIDYITGLDAKIERVAKEFDAFLEKVIKEHMDFKKRGEDEEQKDLVDILLWLQRENLAGFPLEMVNIKAILLDVFAAGIDTTYTVMEWAMTRLLKHPRVMKKLQSEVREIAADKTYVSEEDIEKMHYLKAVIKETLRLHPPIPLLVPRESTQDIKLKGYDIKGGSRIMINAWAIGRDPKWWEEAEEFRPERFMNNGIDYKGHDFQLIPFGAGRRGCPGIVFATAINEVVLANVVLNFEWSLGDGVKPEDLDMTQVFALAIHRKFPLVAVANSYSPPSRKKSGVYEEKGSVPLPPMLR | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 48908128 | 48910255 | - | evm.model.ptg000008l.102 | HCH8g1433 | 550531 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH8g1433 | 529 | CDD | CYP71-like | 72 | 498 | - | - | |
| HCH8g1433 | 529 | Pfam | Cytochrome P450 | 44 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | SUPERFAMILY | Cytochrome P450 | 42 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | Gene3D | Cytochrome P450 | 35 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1433 | 529 | FunFam | Cytochrome P450 83B1 | 30 | 501 | - | - | |
| HCH8g1433 | 529 | PANTHER | CYTOCHROME P450 71B11-RELATED | 21 | 502 | IPR050193 | - | |
| HCH8g1433 | 529 | MobiDBLite | consensus disorder prediction | 506 | 529 | - | - | |
| HCH8g1433 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH8g1251 | HCH-Chr8:47794809 | HCH8g1433 | HCH-Chr8:48908128 | 2.50E-93 | dispersed | |
| HCH8g1433 | HCH-Chr8:48908128 | HCH9g1132 | HCH-Chr9:14652877 | 3.30E-85 | dispersed | |
| HCH8g1432 | HCH-Chr8:48903513 | HCH8g1433 | HCH-Chr8:48908128 | 4.50E-241 | tandem | |
| HCH8g1433 | HCH-Chr8:48908128 | HCH8g1434 | HCH-Chr8:48916939 | 8.80E-155 | tandem |
Pathway information