Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH8g1456 | ATGAAGAAAGCAACAGCAAGCAGCATAATTCTTCTTTTGGTATCTCTTTCTCTACAACAAGTAGCTCATTTTACATTGGCTCTATCTCTTTCGGATAGTAATCAGGATATGGAGCAATCTGGAACTTCAAGAACTTTCAAGCAAGCAGAAGAGCATGCTCATGAAGTACATTGTTCCAGGAAAAGAAGCAGGACAGCATGGAATATTATTGAGGAGCATCTAATGCCATTTGTGGAGAGGGAAAATTATCAGATTTCAACAAAGTGTAGGCTTCATCCAAACAATGATCTGTATAGAGACCAGGAGGAGCACAAGATTCATTTGGATATAAATGATTGGCAGTGTGGATATTGTAAGAAAAGCTTTCGTGCTGAAAAATTTCTTGAACAACATTTTGACAACAGACACTACAATCTTCTGAATGTTAGCAATGGCAAGTGCATAGCTGATTTATGTGGGGCGTTACACTGTGACCTTAAGATGGATACCAAATTGCACAAGCCCAAATGCAATCCTGCAGCTGCTGTTAGGAACAAGCATTTATGCGAGAGTCTTGCTGATCGCTGTTTTCCTATTAATGAGGGACCGTCAGCAAGCCGACTTCATGAATTATTTCTACACCAATTTTGTGAAGCTCATTCTTGCCCTCGGAAGCAAAAGCCATTTTCTAGAGGGGTGAAGAGGCAAGCAGGTGTATTTTACCTGGCTGCTTCAATATTGACTTTGTTGTTGCTCCCTCTTTTCTATGTCATTGTCTATTTACACTACAGAGAATCGAAAAATGGAATCCAAGTGCTTAGACGAATCTCGAAAGCAGGACGGAAATCAAAGCCCTCATAA | 840 | 40.12 | MKKATASSIILLLVSLSLQQVAHFTLALSLSDSNQDMEQSGTSRTFKQAEEHAHEVHCSRKRSRTAWNIIEEHLMPFVERENYQISTKCRLHPNNDLYRDQEEHKIHLDINDWQCGYCKKSFRAEKFLEQHFDNRHYNLLNVSNGKCIADLCGALHCDLKMDTKLHKPKCNPAAAVRNKHLCESLADRCFPINEGPSASRLHELFLHQFCEAHSCPRKQKPFSRGVKRQAGVFYLAASILTLLLLPLFYVIVYLHYRESKNGIQVLRRISKAGRKSKPS | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 49008175 | 49011272 | - | evm.model.ptg000008l.79 | HCH8g1456 | 550554 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH8g1456 | 279 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 115 | 136 | IPR013087 | - | |
HCH8g1456 | 279 | PANTHER | ZINC FINGER PROTEIN-RELATED | 3 | 279 | - | GO:0000976(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH8g1456 | HCH-Chr8:49008175 | HCH9g0090 | HCH-Chr9:489256 | 9.50E-92 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
34092 | None | None | None | None | HCH | TF |
Pathway information
