Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1460 ATGGCGAGAGTTAATGACAATTGGGAGAGGCTAGTACGCGCGACTTTAAAAAGAGAGCAGCTGAGAAATGCAGGACAAGGCCATGGAAGAACTCCAAGTGGTATCGTTGGAGCTGTTCCTTCTTCTCTTGGAAGAACCAACATTGAAGCTATTCTCCAAGCTGCTGATGAAATTCAATCTGAGGATTCTCACGTTGCTAGGATTTTGTGTGAGCAGGCATATACTATGGCGCAGAACTTAGATCCCAACAGTGACGGTAGAGGCGTTCTTCAATTCAAGACTGGTTTGATGTCTGTTATTAAGCAAAAACTTGCAAAGAAGGATGGGGCGTCTCTAGATCGTAATCGTGATATTGAGCATCTGTGGGAGTTCTACCAGCGATATAAGAGACGACATAAAGTAGATGATATACAAAAAGAAGAACAGAAATGGCGGGAATCGGGAACAATGAGTGCTAACATGGGAGAGTTGGAGCTTAGGTATTCTGAGGCGAGGAAAGTAATTGCTAACCTCAGGGCTTTAGTTGAGGTGATGGAGGCACTTAGCAAAGATGCAGATCCACATGGAGTTGGAAGGTTGATTACGGAGGAGCTACGAGGACTTAGAAATTCTGATGCTACACTATCTGGGGAGCTTACACCGTACAATATTGTACCTCTGGAGGCACACTCACTGACCAATGCCATTGGAATTTTTCCTGAAGTGAGGGCTACAATATCAGCAATCAGATATACAGAACATTTCCCCAAGCTGCCTTTGGAATTTGAAATATCTGGACAAAGGAAGGCAGATATGTTTGACCTTCTTGAATATGCATTTGGATTTCAGAGGGACAACATAAGAAACCAACGAGAGCATGTGGTTCTCACAATACTGAATGCTCAATCTCGTTTTGGCATACCTGTTGATGCTGATCCAAAAATAGATGAGAAAGCAATCAACGTGGTTTTCTTGAAGGTTCTTGATAACTACATCAAATGGTGTAGATACTTGCATCTTCGCGTTGCATGGAATAGTTTAGAGGCAATTAATAGGGACAGGAAGCTTTTCCTGGTTTCCTTATACTTGCTTATATGGGGTGAAGCTGCAAATGTTCGCTTCCTTCCTGAATGCATTTGCTACTTGTTCCACCATATGGCAAAAGAATTGGATGTTATACTTGACCATGGAGTAGCTATTCGCGCTGCTAGCTGTCTGTTGGAAGATGGTTCTGTGTCCTTCCTTCAACAAATCATTTGTCCTATATATCAGACAATTCTTGCTGAAACTGAACGAAACAAAAATGGGAAAGCTGCACATTCAGCATGGAGGAACTATGATGATTTCAATGAATACTTTTGGTCACCTACTTGTTTTGAGTTGAGCTGGCCTATGAAGATGGAATCAAGTTTCTTACAGAAGCCTAGAGGCTCAAAACGGACTGGCAAGACCTCTTTTGTTGAGCATCGTACATTTCTTCACTTGTATCGAAGTTTCCACCGACTCTGGATCTTTTTGGCAATTATATTCCAGGCTTTGACAATTTTTGCCTTCAATAATGAGCGCATTAATTTGAACACTTTCAAAGCTATTCTTAGCATTGGGCCAACATTTGCCATCATGAACTTTATCGAGAGTTGTTTAGATGTTTTGCTTACTTTTGGGGCATACACTACTGCAAGAGGCATGGCTATATCAAGGATTGTTATTAGGTTCTTCTGGTGGGGATTGAGTTCTGTGTCTGTGACTTATATTTACGTGAAGGTTCTTCAAGAAAGAAATAGCCGAAGCTCAGATAGCTCATTCTATTTTCGAATATATATTATAGTTTTGGGTGTTTATGCTTCTTTACGCCTTCTAATTGCAATGTTGCTCAAGTTTCCAGCATGTCATAGACTTTCTGAGATGTCAGATCAATCTTTTTTTCAATTTTTCAAGTGGATTTATCAGGAACGTTATTATGTGGGTCGCGGTCTATATGAAAAACCGAGCGATTATTGCAGATATGTAGCCTTTTGGTTGGTGCTCTTGATTTGTAAATTCACTTTTGCTTACTTTCTCCAGATTAAACCACTTGTCCGACCAACCACTATTATTGTGAACCTTCCAGCTCTTGATTATTCGTGGCATTCCTTGATCTCAAAGAATAATAATAATGTGTCGACTATAGCTAGTTTATGGGCTCCTGTTGTTGCTCTTTATCTCTTGGACATTTACATATGGTACACACTTTTGTCGGCCGTCATTGGTGGTGTAAAGGGTGCACGGGCTCGGTTGGGTGAGATAAGGTCACTTGAAATGATACATAAGCGGTTCGAGAGCTTTCCAGAAGCATTTGTTAAGAACCTTGTCTCTTCAGAAACAAAAAGACAAGTAGTGCCTGAGGATTCGCCGTATGTGAACAAGATATATGCAGCAATTTTTTCTCCATTTTGGAATGAAATTATTAAAAGTTTACGTGAGGAAGACTACATTAGCAATAGGGAGATGGACTTACTATCTATCCCTAGCAATACTGGGAGTCTCAGATTGGTCCAATGGCCTTTATTTCTTTTAAGTAGTAAGATATTCTTGGCTGTCGATTTTGCTTTGGATTGTAAAGATACACAGACTGATCTATGGAATAGAATATATCGGGATGAGTATATGGCATATGCAGTTCAAGAATGCTACTATAGCGTTGAAAAAATTTTACATTCCCTTGTTGATGGTGAAGGGAGACTTTGGGTTGAAAGGATTTTTCGGGAGATCAACAATAGTATTTCTGAGGATTCTCTTGTTATAACATTGAATCTTAAGAAGATTCCACTTGTGCTACAAAAATTTACGGCTCTTACAGGGCTTTTGACTCGGAGTGAAACTCCTGAACTTGCAAAAGGTGCTGCAAAAGCTATATTTGAGCTTTATGAGGTTGTTACACATGACCTGCTTTCATCAGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAATGAAGGTCGCCTTTTCTCTCGGATAGAATGGCCTAAAGATCCAGAAATTAAAGAGCTTGTGAAGCGTTTGCATTTGCTTCTGACAGTGAAGGATTCTGCAGCCAATATCCCAAAAAATCTTGAAGCAAGGAGAAGATTAGAATTCTTTACAAATTCATTATTTATGGACATCCCTTCAGCAAAACCTGTCAGCGAAATGGTGCCATTCAGTGTCTTTACTCCATATTACAGTGAAACAGTGCTCTATAGTTCCTCTGAACTGCAAAAGGAAAATGAGGATGGGATATCCATCCTTTTCTATCTTCAGAAGATTTTTCCAGATGAATGGGAGAACTTTCTGGAACGAATTGGTCGAGGTCATGCGACCGGCGAAGCTGAACTTCAAAAAAGCCCAAGCGATTCTTTGGAGCTTCGATTTTGGGTTTCATATCGAGGGCAGACTCTAGCTAGGACAGTTCGTGGCATGATGTACTACAGAAGAGCTTTAATGCTTCAGAGCTATCTGGAGAGGAGATCATTTGGAGATGATTATTCTCAAACCAACTTCCCCACAAGTCAAGGTTTTGAGTTGTCTCGAGAATCAAGAGCACAAGCAGACTTGAAGTTTACTTATGTCGTTTCATGTCAAATATATGGGCAACAAAAACAGAGAAAAGCTCCGGAGGCTGCTGATATTGCTCTTTTACTGCAGAGGAATGAGGCATTACGCGTTGCATTCATCCATGTGGAAGACAGTATTCAACCTGATGGCAGCTTAGTAAAGGAATTTTATTCAAAGCTTGTTAAAGCTGATATCCATGGAAAAGATCAGGAGATATATTCGATCAAACTTCCAGGAGAACCAAAGCTAGGAGAAGGAAAACCTGAAAACCAAAATCATGCGATAATTTTCACTCGTGGAGATGCTGTTCAGACTATTGATATGAATCAGGATAACTATCTTGAAGAAGCAGTGAAAATGAGAAATCTTCTTGAGGAATTTCATGAAAAGCATGGTCTTCGTCCTCCTACCATCCTTGGCGTTAGGGAGCATGTATTCACAGGAAGTGTCTCTTCATTAGCGTGGTTCATGTCCAATCAAGAAACTAGCTTTGTAACCTTGGGACAACGTGTTTTGGCAAGTCCACTCAAAGTCCGGATGCATTATGGACATCCTGATGTATTTGACCGTATATTTCATATAACTCGAGGTGGCATTAGTAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGACAGGGTAACATTACACACCACGAGTACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAGATTGCCCTGTTTGAAGGTAAAGTAGCAGGTGGGAATGGAGAGCAAGTCCTTAGCAGGGATATTTACAGGATAGGGCAACTTTTTGATTTCTTCAGAATGCTCTCGTTTTACTTCACAACTGTTGGATACTATGCATGCACAATGATGACTGTCCTTGTGGTTTATATATTCTTGTATGGAAGGGTTTATCTGGCCTTTTCTGGACTTGACGAAGCAATCTCGAAACAAGCAAAAATTCTTGGGAACACAGCATTGGATGCTGCTCTGAATGCTCAGTTTCTGTTTCAGATTGGAGTTTTTACTGCAGTCCCTATGATAATGGGTTTTATACTAGAACTTGGACTGCTGAAGGCAGTTTTCAGCTTTATAACAATGCAGCTTCAGTTGTGTTCTGTCTTTTTCACATTTTCATTGGGAACTAGAACTCATTACTTTGGAAGAACAATCCTTCATGGTGGTGCCAAGTATCGGGCAACTGGTAGAGGTTTTGTTGTCCGGCATATCAAATTTGCTGAAAATTATCGGCTTTACTCAAGAAGTCATTTCATCAAGGCGCTTGAGGTGGCATTGCTTCTAATTGTCTACATCGCATATGGGTTTTCAGAAGGAGGTGCAAGTTCTTTTGTTTTGCTAACCCTTAGCAGTTGGTTCCTCGTCATCTCGTGGCTCTTTGCTCCTTATATCTTTAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAAGATTTTGACGATTGGACTAGCTGGCTATTCTACAAAGGGGGAGTAGGAGTGAAGGGAGATAACAGCTGGGAGTCATGGTGGGATGAAGAACAGTCGCATATTCAAACATTGCGAGGTCGAATATTGGAGACAATTTTGACTGTGAGGTTCTTAATATTTCAATATGGCGTTGTCTACAAGCTCCATCTCACAGGAAAGGATACATCACTAGCGATATATGGCTTTTCGTGGGTTGTGATAGTTGTGATTGTCTTCATATTTAAGATCTTCACCTTTAGTCCGAAAAAATCGACAAACTTCCAGCTGTTTATGAGATTCATTCAGGGTGTCACAGCGATAACTCTGGTCACGGCCCTCGGTCTCATTGTTGGCTTTACTGAACTGTCAATCCCTGACTTATTTGCAAGTATTCTTGCATTTATTCCAACTGGATGGGCTATACTATGTTTTGCAGTTACTTGGAAGAAACTAGTGAAGAGTCTAGGTTTGTGGGATTCAGTTCGTGAATTTGCCAGAATGTATGATGCTGGGATGGGGTTGATAATATTTGTCCCAATTGCATTCTTATCCTGGTTCCCATTCATTTCCACGTTCCAGTCTCGCCTACTCTTCAACCAAGCTTTTAGTCGTGGACTCGAGATCTCGCTCATCCTCGCTGGAAACAAAGCTAACGTCGAGACGTAA 5703 40.79 MARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPSSLGRTNIEAILQAADEIQSEDSHVARILCEQAYTMAQNLDPNSDGRGVLQFKTGLMSVIKQKLAKKDGASLDRNRDIEHLWEFYQRYKRRHKVDDIQKEEQKWRESGTMSANMGELELRYSEARKVIANLRALVEVMEALSKDADPHGVGRLITEELRGLRNSDATLSGELTPYNIVPLEAHSLTNAIGIFPEVRATISAIRYTEHFPKLPLEFEISGQRKADMFDLLEYAFGFQRDNIRNQREHVVLTILNAQSRFGIPVDADPKIDEKAINVVFLKVLDNYIKWCRYLHLRVAWNSLEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDVILDHGVAIRAASCLLEDGSVSFLQQIICPIYQTILAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELSWPMKMESSFLQKPRGSKRTGKTSFVEHRTFLHLYRSFHRLWIFLAIIFQALTIFAFNNERINLNTFKAILSIGPTFAIMNFIESCLDVLLTFGAYTTARGMAISRIVIRFFWWGLSSVSVTYIYVKVLQERNSRSSDSSFYFRIYIIVLGVYASLRLLIAMLLKFPACHRLSEMSDQSFFQFFKWIYQERYYVGRGLYEKPSDYCRYVAFWLVLLICKFTFAYFLQIKPLVRPTTIIVNLPALDYSWHSLISKNNNNVSTIASLWAPVVALYLLDIYIWYTLLSAVIGGVKGARARLGEIRSLEMIHKRFESFPEAFVKNLVSSETKRQVVPEDSPYVNKIYAAIFSPFWNEIIKSLREEDYISNREMDLLSIPSNTGSLRLVQWPLFLLSSKIFLAVDFALDCKDTQTDLWNRIYRDEYMAYAVQECYYSVEKILHSLVDGEGRLWVERIFREINNSISEDSLVITLNLKKIPLVLQKFTALTGLLTRSETPELAKGAAKAIFELYEVVTHDLLSSDLREQLDTWNILLRARNEGRLFSRIEWPKDPEIKELVKRLHLLLTVKDSAANIPKNLEARRRLEFFTNSLFMDIPSAKPVSEMVPFSVFTPYYSETVLYSSSELQKENEDGISILFYLQKIFPDEWENFLERIGRGHATGEAELQKSPSDSLELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLERRSFGDDYSQTNFPTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEALRVAFIHVEDSIQPDGSLVKEFYSKLVKADIHGKDQEIYSIKLPGEPKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYLEEAVKMRNLLEEFHEKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRIGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFSGLDEAISKQAKILGNTALDAALNAQFLFQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGFSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGDNSWESWWDEEQSHIQTLRGRILETILTVRFLIFQYGVVYKLHLTGKDTSLAIYGFSWVVIVVIVFIFKIFTFSPKKSTNFQLFMRFIQGVTAITLVTALGLIVGFTELSIPDLFASILAFIPTGWAILCFAVTWKKLVKSLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVET 1900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49028492 49061650 + evm.model.ptg000008l.75 HCH8g1460 550558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1460 1900 Coils Coil 154 174 - -
HCH8g1460 1900 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 348 456 IPR026899 -
HCH8g1460 1900 SMART FKS1_dom1_2 346 459 IPR026899 -
HCH8g1460 1900 Pfam 1,3-beta-glucan synthase component 1025 1795 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
HCH8g1460 1900 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 38 1895 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH7g0044 HCH-Chr7:304959 HCH8g1460 HCH-Chr8:49028492 0.00E+00 dispersed
HCH8g0492 HCH-Chr8:41370573 HCH8g1460 HCH-Chr8:49028492 0.00E+00 dispersed
HCH8g1460 HCH-Chr8:49028492 HCH8g0491 HCH-Chr8:41235869 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1460 K11000 - csv:101217890 3497.6