Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1474 ATGCATACTTCACCCATGATTTCTCTATATATAAACCTCTTAACTATCAGAGTTTCTCTGTGCCCAATTTTCCTAGTTAGCATGCAACTTCTCCTTCTCCTTTCCATTCCAATTCCCATGTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTACTTCTCTCCACTTTCTTCTTCCTCTATAGATTCTACTCCTCCTCCTCCTCCTCCTCCTCCCATTATTCCCCTCCTTCTTACCCATTCATAGGCTGTCTCATCTCTTTCTTCAAAAACCGACGTCGTCTTCTCCATTGGTACACTGATCTTCTCTCAAACTCTCCCACTCTAACCATTTTGGTCCACCGCCTTGGCTCACGCCGCACCATTGTCACTGCCGACCCCGTTAATGTTGAGTACATGCTCAAGACTAACTTTGTTAATTACCCTAAAGGTAAGCCCTTCACCGATATACTCGGTGATCTTCTCGGCTTCGGCATTTTCAACGTCGACGGTGAATTATGGTCTACTCAACGTAAGTTAGCTAGCCATGAATTCACTACTAAGTCCCTTAGAGAATTCGTTGTCAAAACCCTTGAAGAAGAAGTCCATCTCCGTTTGATACCTTTGCTTCAGAAGGCTTCAAAGACTAATTGTATCTTGGATTTACAAGATGTATTAAAAAGACTCGCTTTTGACACCATCTGTAAGGTTTCGCTCGGAACTGACCAGCAATGCTTGGACTTGTCGCGTCCAGTTCCACCTCTTGTAAATGCCTTCGACACGGCAACGGAAGTCAGTGCGAAGAGAGCAATAGCGCCGGTGTTCCTCGCATGGAAGGCTAAGCGCATACTAAATATCGGGTCTGAAAAGAAGCTCAAAGAATCAGTACAGCTCGTTCACACCTGGGTCTCAGAGGTCATTCACAACAAAAAGCTAAAAAGCCAGCTTCAAAATGAAGGGAACATTGATTGCGGCGGCGATTTGTTGTCTCGTCTATTATCGGCCGGACATGGCGAAGAAGTAGTAAGAGATATGGTGATAAGCTTCATAATGGCAGGGCGTGATACCACTTCCGCAGCCATGACCTGGTTGTTTTGGTTGCTCACTCAACACCCAAATGCGGAAGAAAATATCTTGGACGAAGTGAATTCTATGTTAAACAATTCTCAAAGATCATTTGTTTATGAAGATTTAAAGGAAATGAAGTATTTAAAAGCATGTTTATGTGAATCAATGAGGCTTTATCCACCGGTTGTTTGGGACTCGAAGCACGCCGCCACCGACGACATTTTACCGGACGGAACTCCGGTGAGAAAAGGAGATAGAGTGACATATTTTCCATATGGAATGGGGAGAATGGAAGAATTATGGGGGAAGAACCGATTGGAGTTTAAACCGGACCGGTGGTTTGGTGACAATGGTGAATTGAAATCAGTCAGTCCATTCAAATTTCCGGTTTTTCAAGCGGGACCCAGGACGTGCCTTGGAAAAGAAATGGCTTTTATTCAAATGAAATACGTAATGGCCACGGTTTTAAAGCGGTTTGAATTTAGACCCGTTTGTAAAAGTGAGCCGGTGTTCGTTCCTTTGTTGACAGCTCATATGGCTGGTGGATTACAGGTTTATGTTAGAGAAAGGACAGACAAAAGTCAACCATTTCCGTGA 1641 43.69 MHTSPMISLYINLLTIRVSLCPIFLVSMQLLLLLSIPIPMSLFFFFFFFFLLLSTFFFLYRFYSSSSSSSSHYSPPSYPFIGCLISFFKNRRRLLHWYTDLLSNSPTLTILVHRLGSRRTIVTADPVNVEYMLKTNFVNYPKGKPFTDILGDLLGFGIFNVDGELWSTQRKLASHEFTTKSLREFVVKTLEEEVHLRLIPLLQKASKTNCILDLQDVLKRLAFDTICKVSLGTDQQCLDLSRPVPPLVNAFDTATEVSAKRAIAPVFLAWKAKRILNIGSEKKLKESVQLVHTWVSEVIHNKKLKSQLQNEGNIDCGGDLLSRLLSAGHGEEVVRDMVISFIMAGRDTTSAAMTWLFWLLTQHPNAEENILDEVNSMLNNSQRSFVYEDLKEMKYLKACLCESMRLYPPVVWDSKHAATDDILPDGTPVRKGDRVTYFPYGMGRMEELWGKNRLEFKPDRWFGDNGELKSVSPFKFPVFQAGPRTCLGKEMAFIQMKYVMATVLKRFEFRPVCKSEPVFVPLLTAHMAGGLQVYVRERTDKSQPFP 546
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 49132513 49134285 - evm.model.ptg000008l.61 HCH8g1474 550572
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1474 546 PANTHER CYTOCHROME P450 52 531 - -
HCH8g1474 546 SUPERFAMILY Cytochrome P450 75 538 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 FunFam Cytochrome P450 66 541 - -
HCH8g1474 546 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 CDD CYP86A 109 531 - -
HCH8g1474 546 Gene3D Cytochrome P450 57 544 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH8g1474 546 Pfam Cytochrome P450 75 515 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0397 HCH-Chr11:3913347 HCH8g1474 HCH-Chr8:49132513 1.70E-113 dispersed
HCH8g1474 HCH-Chr8:49132513 HCH9g0504 HCH-Chr9:3215122 4.70E-119 dispersed
HCH5g0071 HCH-Chr5:439890 HCH8g1474 HCH-Chr8:49132513 7.70E-119 transposed
HCH8g0401 HCH-Chr8:36094797 HCH8g1474 HCH-Chr8:49132513 9.50E-109 transposed
HCH8g1474 HCH-Chr8:49132513 HCH9g0063 HCH-Chr9:366181 5.50E-160 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1474 K20665 - csv:101202989 733.021