Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH8g1474 | ATGCATACTTCACCCATGATTTCTCTATATATAAACCTCTTAACTATCAGAGTTTCTCTGTGCCCAATTTTCCTAGTTAGCATGCAACTTCTCCTTCTCCTTTCCATTCCAATTCCCATGTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTACTTCTCTCCACTTTCTTCTTCCTCTATAGATTCTACTCCTCCTCCTCCTCCTCCTCCTCCCATTATTCCCCTCCTTCTTACCCATTCATAGGCTGTCTCATCTCTTTCTTCAAAAACCGACGTCGTCTTCTCCATTGGTACACTGATCTTCTCTCAAACTCTCCCACTCTAACCATTTTGGTCCACCGCCTTGGCTCACGCCGCACCATTGTCACTGCCGACCCCGTTAATGTTGAGTACATGCTCAAGACTAACTTTGTTAATTACCCTAAAGGTAAGCCCTTCACCGATATACTCGGTGATCTTCTCGGCTTCGGCATTTTCAACGTCGACGGTGAATTATGGTCTACTCAACGTAAGTTAGCTAGCCATGAATTCACTACTAAGTCCCTTAGAGAATTCGTTGTCAAAACCCTTGAAGAAGAAGTCCATCTCCGTTTGATACCTTTGCTTCAGAAGGCTTCAAAGACTAATTGTATCTTGGATTTACAAGATGTATTAAAAAGACTCGCTTTTGACACCATCTGTAAGGTTTCGCTCGGAACTGACCAGCAATGCTTGGACTTGTCGCGTCCAGTTCCACCTCTTGTAAATGCCTTCGACACGGCAACGGAAGTCAGTGCGAAGAGAGCAATAGCGCCGGTGTTCCTCGCATGGAAGGCTAAGCGCATACTAAATATCGGGTCTGAAAAGAAGCTCAAAGAATCAGTACAGCTCGTTCACACCTGGGTCTCAGAGGTCATTCACAACAAAAAGCTAAAAAGCCAGCTTCAAAATGAAGGGAACATTGATTGCGGCGGCGATTTGTTGTCTCGTCTATTATCGGCCGGACATGGCGAAGAAGTAGTAAGAGATATGGTGATAAGCTTCATAATGGCAGGGCGTGATACCACTTCCGCAGCCATGACCTGGTTGTTTTGGTTGCTCACTCAACACCCAAATGCGGAAGAAAATATCTTGGACGAAGTGAATTCTATGTTAAACAATTCTCAAAGATCATTTGTTTATGAAGATTTAAAGGAAATGAAGTATTTAAAAGCATGTTTATGTGAATCAATGAGGCTTTATCCACCGGTTGTTTGGGACTCGAAGCACGCCGCCACCGACGACATTTTACCGGACGGAACTCCGGTGAGAAAAGGAGATAGAGTGACATATTTTCCATATGGAATGGGGAGAATGGAAGAATTATGGGGGAAGAACCGATTGGAGTTTAAACCGGACCGGTGGTTTGGTGACAATGGTGAATTGAAATCAGTCAGTCCATTCAAATTTCCGGTTTTTCAAGCGGGACCCAGGACGTGCCTTGGAAAAGAAATGGCTTTTATTCAAATGAAATACGTAATGGCCACGGTTTTAAAGCGGTTTGAATTTAGACCCGTTTGTAAAAGTGAGCCGGTGTTCGTTCCTTTGTTGACAGCTCATATGGCTGGTGGATTACAGGTTTATGTTAGAGAAAGGACAGACAAAAGTCAACCATTTCCGTGA | 1641 | 43.69 | MHTSPMISLYINLLTIRVSLCPIFLVSMQLLLLLSIPIPMSLFFFFFFFFLLLSTFFFLYRFYSSSSSSSSHYSPPSYPFIGCLISFFKNRRRLLHWYTDLLSNSPTLTILVHRLGSRRTIVTADPVNVEYMLKTNFVNYPKGKPFTDILGDLLGFGIFNVDGELWSTQRKLASHEFTTKSLREFVVKTLEEEVHLRLIPLLQKASKTNCILDLQDVLKRLAFDTICKVSLGTDQQCLDLSRPVPPLVNAFDTATEVSAKRAIAPVFLAWKAKRILNIGSEKKLKESVQLVHTWVSEVIHNKKLKSQLQNEGNIDCGGDLLSRLLSAGHGEEVVRDMVISFIMAGRDTTSAAMTWLFWLLTQHPNAEENILDEVNSMLNNSQRSFVYEDLKEMKYLKACLCESMRLYPPVVWDSKHAATDDILPDGTPVRKGDRVTYFPYGMGRMEELWGKNRLEFKPDRWFGDNGELKSVSPFKFPVFQAGPRTCLGKEMAFIQMKYVMATVLKRFEFRPVCKSEPVFVPLLTAHMAGGLQVYVRERTDKSQPFP | 546 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 49132513 | 49134285 | - | evm.model.ptg000008l.61 | HCH8g1474 | 550572 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH8g1474 | 546 | PANTHER | CYTOCHROME P450 | 52 | 531 | - | - | |
| HCH8g1474 | 546 | SUPERFAMILY | Cytochrome P450 | 75 | 538 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | FunFam | Cytochrome P450 | 66 | 541 | - | - | |
| HCH8g1474 | 546 | PRINTS | E-class P450 group I signature | 333 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | PRINTS | E-class P450 group I signature | 476 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | PRINTS | E-class P450 group I signature | 486 | 509 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | PRINTS | E-class P450 group I signature | 353 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | PRINTS | P450 superfamily signature | 486 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | PRINTS | P450 superfamily signature | 398 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | PRINTS | P450 superfamily signature | 344 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | PRINTS | P450 superfamily signature | 477 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | CDD | CYP86A | 109 | 531 | - | - | |
| HCH8g1474 | 546 | Gene3D | Cytochrome P450 | 57 | 544 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH8g1474 | 546 | Pfam | Cytochrome P450 | 75 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g0397 | HCH-Chr11:3913347 | HCH8g1474 | HCH-Chr8:49132513 | 1.70E-113 | dispersed | |
| HCH8g1474 | HCH-Chr8:49132513 | HCH9g0504 | HCH-Chr9:3215122 | 4.70E-119 | dispersed | |
| HCH5g0071 | HCH-Chr5:439890 | HCH8g1474 | HCH-Chr8:49132513 | 7.70E-119 | transposed | |
| HCH8g0401 | HCH-Chr8:36094797 | HCH8g1474 | HCH-Chr8:49132513 | 9.50E-109 | transposed | |
| HCH8g1474 | HCH-Chr8:49132513 | HCH9g0063 | HCH-Chr9:366181 | 5.50E-160 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH8g1474 | K20665 | - | csv:101202989 | 733.021 |