Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH8g1518 ATGGAAGAGAAAGAGAAAGAGAAGCCTTTTTCTTTTTCTATTTCTACTACGCCTTCCAACCAATACCATCATCAGGAAGAAGAAGAAGAAGAAGAAGAAGAACGCAAGGATTCGGAATTTGATCTCCGATCCGACGATCCTCAACTCTCTCCACTCCCCCACACTGTTACTTCCCGTGTGTTATACATGTTAGGAGATATTGCTTCAGGTCCTGCTTTTAGGTTCTCTCAATGGATTGAATTGGTCCGTAAACGTAATGCCAGATATCGCGCCTCTCCCTTCCTTCTCCCCTCTGGTGGGGAGGAAGACCTTCTTACTGAATCAACAACAACAACCACTCCTCCTCCTTCTCCTCATCACCATTCCACTGAAACCTGTTTATGGGAAAGACTTGCTAACGCTTCCATGTTGGACATTGATTCTAATTCTTTTTCCTGGGACTCCCTTTTGTCTCTTCACCGCACCGAACACAGTACTACTACCGATCAACTTCATTCTGAAGATGACATCAATAAACCCCTTGAGGTCACTGTTAATTCTGGCGGAGTTGTTTTCTTTGCCCTCTTCAATCACCTTCCTCTTCCTAATGACCCTCATTCCCCCAAGGAAGCTGCTGCTGTTATTAAGATATCATCTTCAAGAATGGCTACGCAATCTGAACGCATGGGCTATGAATTTGCTAAGTGGCTTGGTGTTCAAACTCCACAGGCTCGAGTCATACATAATTCTAGCATCGAGTGGCTTCAGATTAAAGAAGCTGCAGAGAAAGCAAGACATGCCGCCAGTTTGGAGGGTGATGAGGTTGGTGAAATGACTTGTTGTGAACTACTGGAAGCTCTTGAATTTAGCAGATGCCTCTTTCTGATGAGTTACGTACATGGATCTCCTTTGTTGGAAAGCTTAAATGCATTTGAATCACGGGAAACAGCAGAAAAATTAGCAGCCGCTATTGGAAGGATTTTATTGTTGGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGTCTTCTTCGTTGGCGTGGAAATGCTGCAAACTTACTCTTGGCTAATAAAATGGCATGCGCTAGTATGAATGCACTTGAGGAAGCCTTTGATTCTGCAATTAAGAAATGTAGACCAAGGGTTGTTACAGCTCTACAAAACGAAAGAAGGGCAACTTCAGTAGATAGTAGACCAAATCCTAATTCAGGGTTGGTAGCAGAAACCTCTGACCTTTGCAATAGCAAGGAGTCTCCAAAATCTTGTAATGCGAGTGTAAAAAGTCAAACATCAGATGAACCAACGCCTTGTGAGCTTAACATTGTGGCTATTGACTCTGGTGTTCCTCGCCGGCCTCCTGCTGGAAAGCGTGCTAATGATCACTCAATTTATCCAAAGTTAGTTGAGTTGCTACTTAATAGTTCTGAGTTTTCCGCTGATCTATTACATGACATTACAGGAGGGAAATTAGGGTTTCCTTCATTAGCTGATGCCAACTCAAATACTGATATACAGTTCACAGATATGACTTCAGTTGTCCATGAATTTCGATATGGGTTCCGTGCTGCTCTCAGGGATCTGCAAGGATTTCACATATTTCTACTTACACTTCACCAGAAGTTGGACAACTCATTACGAGCATTTTTGAATATCATTAATAGATTTTCCTCAGGGGAGTCTGATAAAGAGGATTTGGCAGTTCCTGAGTATCCTCTCCCGGCTTCTGCCAGTAGCCATTGTCCATCTCCACGTGGTAAGGACCGAGCCTTTAATGACAGTAATATGGATGTTAGTGATTCAGCTCCAAGGACATCCTCCTCAGGAAATAAAGAAGGCTCTGACTCATCTTCTCCTTTTTCACGAGATAGCTCACAAGGAAAGTTATATAAAGGAAGTGGAGAGCCCATTCACAGCCTTCGTTTGACTGCAAAGCTTCGAGACTTTCATAAATTTGCCAAGGTGGATGCTGAATCGAATAAGGAATTGGATTCATGGAATGAAATGCTAAAGTATGAAGCTGTTAAACTTTGCCAGGAGAATAATTTTAACACGGGGTTTTTTGAGGGCAGCGATAGCCATGGAGTTGTTGATGCTTATGAATTAAAAATAAGGCTTGAGCACATTCTTGAAAGGATTGCACTAATATCAGAGGCTGCAAATACAGAAAGGCCCTCCTCAGTTACAGCTACATTGTTTATAGGTGGTGCCTTGGCTGCAAGATCTATCTACACACTTCAACATCTAGGAATCACTCATATTTTATGTCTCTGCTCGAATGAAATTGGACAGTCAGATTCTCAGTTTCCCGATCTCTTTGAATACAAAAATTTTTCAATAAGTGATGATGAAGATACAAACATCAGCAGCATCTTTGATGAAGCTTCTGATTTTATTGATCATGTTGAGGAAAAAGGTGGGAAGGTATTGGTTCATTGCTTTGAAGGGAGAAGTAGAAGTGCCACATTGGTACTTGCCTACTTGATGACCAGGAAGAAATATACACTGTTAAAAGCATGGAACGCTTTGAAACGAGTTCACCGCCGAGCTCAGCCCAATGACGGGTTTGCAAAAATATTACTAGAACTTGATCGTAGAATACATGGAAAAGTTTCAATGGAGTGGCAATCACGGAAACCGACAATGAAAGTTTGCCCGATTTGCGGGAAAAATGCTGGTCTGAGTAGCAGCTCACTGAAGCTTCATCTGCAAAAATCACACAAGAAGCTGTCGTCAGGGAGTGTAGATAGTGCAATGACTATGGAAATACAGAAGGCACTGACAGCACTGAAAATTAGCCGTGGTGGGAGCGTAAGCCCCACACAGGCAATCTCTTTTGATCTTGGATGA 2829 42.45 MEEKEKEKPFSFSISTTPSNQYHHQEEEEEEEEERKDSEFDLRSDDPQLSPLPHTVTSRVLYMLGDIASGPAFRFSQWIELVRKRNARYRASPFLLPSGGEEDLLTESTTTTTPPPSPHHHSTETCLWERLANASMLDIDSNSFSWDSLLSLHRTEHSTTTDQLHSEDDINKPLEVTVNSGGVVFFALFNHLPLPNDPHSPKEAAAVIKISSSRMATQSERMGYEFAKWLGVQTPQARVIHNSSIEWLQIKEAAEKARHAASLEGDEVGEMTCCELLEALEFSRCLFLMSYVHGSPLLESLNAFESRETAEKLAAAIGRILLLDLVIRNEDRLPCRLLRWRGNAANLLLANKMACASMNALEEAFDSAIKKCRPRVVTALQNERRATSVDSRPNPNSGLVAETSDLCNSKESPKSCNASVKSQTSDEPTPCELNIVAIDSGVPRRPPAGKRANDHSIYPKLVELLLNSSEFSADLLHDITGGKLGFPSLADANSNTDIQFTDMTSVVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFLNIINRFSSGESDKEDLAVPEYPLPASASSHCPSPRGKDRAFNDSNMDVSDSAPRTSSSGNKEGSDSSSPFSRDSSQGKLYKGSGEPIHSLRLTAKLRDFHKFAKVDAESNKELDSWNEMLKYEAVKLCQENNFNTGFFEGSDSHGVVDAYELKIRLEHILERIALISEAANTERPSSVTATLFIGGALAARSIYTLQHLGITHILCLCSNEIGQSDSQFPDLFEYKNFSISDDEDTNISSIFDEASDFIDHVEEKGGKVLVHCFEGRSRSATLVLAYLMTRKKYTLLKAWNALKRVHRRAQPNDGFAKILLELDRRIHGKVSMEWQSRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQAISFDLG 942
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 49308505 49312969 + evm.model.ptg000008l.17 HCH8g1518 550616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH8g1518 942 ProSiteProfiles Dual specificity protein phosphatase domain profile. 717 862 IPR020422 GO:0006470(InterPro)
HCH8g1518 942 MobiDBLite consensus disorder prediction 1 53 - -
HCH8g1518 942 Pfam Dual specificity phosphatase, catalytic domain 728 858 IPR000340 GO:0016311(InterPro)
HCH8g1518 942 SUPERFAMILY Protein kinase-like (PK-like) 77 455 IPR011009 -
HCH8g1518 942 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 26 936 IPR035010 GO:0004721(InterPro)|GO:0009737(InterPro)|GO:0043622(InterPro)
HCH8g1518 942 SMART dsp_5 717 859 IPR020422 GO:0006470(InterPro)
HCH8g1518 942 MobiDBLite consensus disorder prediction 588 621 - -
HCH8g1518 942 Pfam Actin-fragmin kinase, catalytic 126 376 IPR015275 -
HCH8g1518 942 MobiDBLite consensus disorder prediction 566 627 - -
HCH8g1518 942 Gene3D Protein tyrosine phosphatase superfamily 696 863 IPR029021 -
HCH8g1518 942 CDD DSP 718 855 - -
HCH8g1518 942 ProSitePatterns Tyrosine specific protein phosphatases active site. 804 814 IPR016130 GO:0016311(InterPro)
HCH8g1518 942 Gene3D - 297 442 IPR036940 -
HCH8g1518 942 MobiDBLite consensus disorder prediction 96 123 - -
HCH8g1518 942 FunFam Dual specificity protein phosphatase PHS1 689 863 - -
HCH8g1518 942 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 782 838 IPR000387 GO:0016311(InterPro)
HCH8g1518 942 MobiDBLite consensus disorder prediction 103 120 - -
HCH8g1518 942 MobiDBLite consensus disorder prediction 383 428 - -
HCH8g1518 942 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 717 861 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH8g1518 K14165 - csv:101220184 1379.0