Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0063 ATGGGTTTCATCTTCTCTCTCTTTCCACTCCGACGGCGACAATCCTTCTTCTCTTTTCTCCCCTTTCTCCTTCTCCATTCATTTCTCTCCACGTTCCGGCAACTTTTTTACTCTTCCGGCAACTCACCCCCCTCATATCCACTCATCGGATGCTTCTTTTCCTTCTATAAAAACCGAAACCGTCTATTAGATTGGTACACTGAGCTTTTATCAACTTCCGCCACCGCCACGATCGTCATCCACCGATTCGGCGCCCGCCGGACCATCGTCACCGCAAATCCCGTCAACGTCGAGTACATTCTAACCAAGCGTTTCAATAACTTTCCAAAAGGGAAACCGTTCACCGAGATATTAGGAGATTTTCTCGGCTACGGTATATTCAACGTCGACGGCGAGCTTTGGAGGACCCAGAGGAAGTTAGCGAGCCATGAATTCAGCGGGAAGTCTTTGAGAGAATTCGTGGTGAAGACATTGGAGGAAGAGGTTGAGAAACGGTTGTTACCGGCGATGGAGACGGGGGCGGTGGTGGATTTGCAAGAAATGCTAAGAGGATTTGGATTTAGGGTAATATGTAAGGTTTCATTAGGGAATGAAGAATGGGATTGGATATGGAAAATGGAGAAAAGTTTTGAGGTGGCGTCGGAAGTGAGTGCGGGGAGAGGAAGGGAAACGGTGAATGGGATTTGGAAAATGAAAAGAAGGTTTCACGTTGGATCTGAGAAGAAGTTGAAGGAAGCCGTTGATGAAGTTCATCGGAATGTGATGAAGATTATCGACGAAAGAAAGAAGAAGATCAATGCCGACAACCAAGATCTCTTGTCCAGGCTGATATGCGCGGGACATGAAGAGGAGGTAATACGAGACATGGCAATAAGCTTCATAATGGCAGGGAGAGATACGACCTCGGCAGCCATGACATGGCTTTTCTGGTTACTTTCTCAACATCCAGACATTGAGAAACAGTTGGTAGACGAGATTGATTCAGAAACAACGTCTCTCATTCCAAATAAGTTGGATTATGAATCCTTGAAGGACCTCAAATTTCTCCATGCATGTCTCTGTGAAACCATGAGACTTTACCCACCTGTTGCTTGGGATTCCAAACACGCCATTGTTAACGATTGCTTACCCGATGGTACTCCGGTTCGAGCTGGAGATAGAGTAACTTACTTCCCATATGGGATGGGAAGAATGGAAGCTTTGTGGGGAAAAGACTGGTTCGAATTCAAACCGAATCGATGGCTTGTCGAATTGGATGGTCATGATCGGAGAAAATCGATAAAGTTAGTGAGTCCTTATAAGTTTCCGATATTCCAGGCAGGCCCGAGGGTGTGTCTGGGAAAGGAGATGGCATTCATTCAGATGAAATATGTAGTGAGTTCCATTCTCAGTCGATTTAAAATCAAACCAGTTTGTTGTGATAATCCAGTGTTTGTGCCACTCTTGACTGCTCATATGGCTGGCGGTTTCAAGGTTATGTTTCAGAACAGAGACACGGACAATTACAAATTGGTTCCCACATGA 1524 45.47 MGFIFSLFPLRRRQSFFSFLPFLLLHSFLSTFRQLFYSSGNSPPSYPLIGCFFSFYKNRNRLLDWYTELLSTSATATIVIHRFGARRTIVTANPVNVEYILTKRFNNFPKGKPFTEILGDFLGYGIFNVDGELWRTQRKLASHEFSGKSLREFVVKTLEEEVEKRLLPAMETGAVVDLQEMLRGFGFRVICKVSLGNEEWDWIWKMEKSFEVASEVSAGRGRETVNGIWKMKRRFHVGSEKKLKEAVDEVHRNVMKIIDERKKKINADNQDLLSRLICAGHEEEVIRDMAISFIMAGRDTTSAAMTWLFWLLSQHPDIEKQLVDEIDSETTSLIPNKLDYESLKDLKFLHACLCETMRLYPPVAWDSKHAIVNDCLPDGTPVRAGDRVTYFPYGMGRMEALWGKDWFEFKPNRWLVELDGHDRRKSIKLVSPYKFPIFQAGPRVCLGKEMAFIQMKYVVSSILSRFKIKPVCCDNPVFVPLLTAHMAGGFKVMFQNRDTDNYKLVPT 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 366181 368036 + evm.model.ptg000007l.63 HCH9g0063 550695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0063 507 CDD CYP86A 77 490 - -
HCH9g0063 507 PANTHER CYTOCHROME P450 29 490 - -
HCH9g0063 507 Pfam Cytochrome P450 43 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 SUPERFAMILY Cytochrome P450 43 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 Gene3D Cytochrome P450 39 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0063 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH9g0063 HCH-Chr9:366181 HCH9g1269 HCH-Chr9:37181708 1.80E-96 dispersed
HCH8g1474 HCH-Chr8:49132513 HCH9g0063 HCH-Chr9:366181 5.50E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0063 K20665 - csv:101207598 667.922