Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0086 ATGCCAAGCGTGGCCGTGAAGCTTTACAGCGTATTCTTCAAGTTTCTCTTGAAGCATCGTTTACAGAACCTGATCCAATCTCCACTCGACGAATCTCGTCCCTTTGGCGTTTCTTCTCGTCCTGAAGAAACCGTTTCTTCCGCCAACCCTTTATTTAACGACGGCGTTGCTACTAAAGACATTCATATCGATCCTTTTACTTCTCTCAGTATTCGGATCTTTCTTCCTGAATCTGCTCTTACTCCTCCCGATCCAGATTCTAAATCCTCTTTCAAACCTAGGGTTGTTAGACCTAGACGGACGAATCATGATTTGGTTCATCCCAATTTGACTGATTTACAACAATACCCTTCTAGGCGTAATAGTTATGGTCCTTCTGCGAATTCTGGGGATGAACCGAGGAGGACTAGTTTTGGGAGTTGTGGGAATGAATTGGAAGGTTTGAATTTGATTCCTGGTACTGCTACTGCTGCTCCTGGCGGTGGTGGTTATAGAGGGTATTCTCCTCTTTTGAAGAATTCTCGAAAATTGCCGGTGATGTTGCAGTTTCACGGTGGGGGTTGGGTTAGTGGGAGTAATGATTCGGCTGCCAATGATTTCTTTTGTCGAAGGATTGCCAAATTGTGTGATGTTATTGTGGTGGCTGTTGGGTATAGGCTTGCCCCGGAGAATAGGTATCCGGCTGCGTTTGAGGATGGTTTGAAGGTGTTGAATTGGCTTGGGAAGCAAGCCAATTTGTCCGAATGTAGTAAGTCTATGGGGAATTCGAAAGGTGGTGGTACGGAGTTTAAGAAATCGGATAATCATCGCCATATTGTCGATACATTTGGGGCGTCAATGGTAGAGCCTTGGTTGGCAGCTCATGGAGATCCTACAAGATGTGTTCTTCTTGGGGTCAGTTGTGGTGCAAATGTTGCAGATTATGTGGCACGAAAGGCCGTGGAGGCCGGTAAGCTCCTGGATCCTGTCAAGGTAGTTGCACAGGTTCTTTTGTACCCATTCTTCATTGGTAGTGTCCCGACGCATTCTGAATTGAAGTTGGCGAATTCATATTTTTATGACAAAGCTATGTGCTTGCTTGCTTGGAAACTATTCCTACCGGAGGAAGAGTTTAGTCTTGATCATCCAGCTGCAAACCCCCTAGTACCTGGTAGAGGTCCACCTTTAAAGCTAATGCCACCTACACTGACAGTGGTGGCTGAACTTGACTGGATGAGAGACCGGGCTATTGCTTACTCTGAAGAACTTCGGAAGGTAAATGTCGATGCACCTGTTCTTGACTACAAGGATGCAGTGCACGAATTTGCGACTCTCGATATTCTTCTCAAGACGCCTCAAGCTCAAGCCTGTGCAGAGGATATTGCCATATGGGTCAAAAAATACATTTCACTACGAGGTCATGAGTTCTCTTATTGA 1416 45.62 MPSVAVKLYSVFFKFLLKHRLQNLIQSPLDESRPFGVSSRPEETVSSANPLFNDGVATKDIHIDPFTSLSIRIFLPESALTPPDPDSKSSFKPRVVRPRRTNHDLVHPNLTDLQQYPSRRNSYGPSANSGDEPRRTSFGSCGNELEGLNLIPGTATAAPGGGGYRGYSPLLKNSRKLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRYPAAFEDGLKVLNWLGKQANLSECSKSMGNSKGGGTEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFIGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFSLDHPAANPLVPGRGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 476419 478506 + evm.model.ptg000007l.86 HCH9g0086 550718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0086 471 Gene3D alpha/beta hydrolase 36 466 IPR029058 -
HCH9g0086 471 PANTHER ARYLACETAMIDE DEACETYLASE 47 440 IPR050466 -
HCH9g0086 471 SUPERFAMILY alpha/beta-Hydrolases 56 462 IPR029058 -
HCH9g0086 471 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787(InterPro)
HCH9g0086 471 MobiDBLite consensus disorder prediction 81 138 - -
HCH9g0086 471 MobiDBLite consensus disorder prediction 107 136 - -
HCH9g0086 471 MobiDBLite consensus disorder prediction 90 106 - -
HCH9g0086 471 Pfam alpha/beta hydrolase fold 180 436 IPR013094 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH9g0086 HCH-Chr9:476419 HCH13g0038 HCH-Chr13:245107 1.10E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0086 - - - 0.0