Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g0143 | ATGATACGTCGTGTTGCTTCAGGTCTTCCTTGTTTAAACACTAATCAAAGGAAATTGATTGCGGCTAATGCACCACGGAAGAGATATCCTGTAAACTCGAAATATTATAAGTTATACGAAGTAGTTGGTGAGGGTGTCAGTGCAACTGTGTATAGGGCTCTTTGTGTTCCGTTAAATGAGATTGTCGCCATTAAGGTTCTTGATTTAGAGAGGTGCAATAATGACCTGGATGTCATTCACCAAGAGGTCAAAGCGATGACCTTGATTGATCATACCAATGTTTTGCAAGCCCATTGTTCTTTCACAACTGACCACTACCTTTGGATTGTGATGCCATACATGGCTGGAGGATCATGCCTTGATATAATGAAATTGGCCCATCCAGAAGGTTTTGAAGAGCCGATTATAGCTTTTTTGTTGCATGAAGTTCTTAAAGCTCTTGTTTATCTTCACTCCCATGGTCACATCCATAGAGATGTGAAGGCTGGCAATATTTTGGTTCATTCAAATGGTGCAGTCAAGCTAGCTGATCTTGGAGTGTCAGCTTCCACATTTGATACTGGAGATAGGCAACGTTCAAGAAACGCTTTTGTGGGCACCCCTTGCTGGATGGCTCCCGAAGTTATGCAGCAATTGCATGGATATGACTTCAAGGCAGATATCTGGTCATTTGGAATAACTGCTCTTGAACTTGCTCATGGCCATGCCCCATTTTCCAAGTATCCACCTATGAAAGTTTTGCTGATGACCTTACAAAATGCACCTCCTGGTCTTCATTATGAACGAGACAAGAGATTCTCAAAGTCATTTAAAGAGATGGTAGCTGCATGCTTAGTGAAGGATCCAAAAAAACGCCCCAAAGCAAAGAAGCTTCTAAAACATCCATTTTTCAAACAAGGACACCCAAATGAATATCTTGTTCGCACTATTCTTGATAGCCTTCCTCCTCTTGAAAATCACTTTGAAATGTTGAAGGCAAAAGAAGCTGAACTTCTTGGGCAGAATAAGAGTCTATATGATGATAAAGAGCAAGAATCACAGAAAGGGTATATTCAAGGAGTGAGTGCCTGGAACTTCAATCTCGATGATTTGAAAAGTCAGGCTGCTCTTATTCAGGATGCCGTGGGAGTAAATGACAGACAAAACGATGAAAAAGATTTTGGTTCTCATGCAGAGAGGACATCAATGGAAAAACTGTGTTGTTTAAACATGACACCTAGTTCTGAGGATGTGTGTCATGATCATCATGATTTAGAGAGTTCAGTTGCTCCAATTCTTCTTAAGCATAATGGAGCGGTAAATAATAGTTATAAGCTGTGCGAGGAAGATATGAACATAGCTAATCTAAGAGAGCATATGAACATAGCTAATGGAAGAGAAGATGTAAACACAGCGAATGGAAGAGAAGATATAAACACAGGGAATGGAAGAGAAGATATAAACACAATTAATCCAAGAGTGGTGGATCAAGAATATAGAATTGATGTAGATTGTACATCCAGTGAACCTGCTGCTCAGTTAAAGGGACGCTTTAAAGTTACATCAGCTGGTCTGGGTCAAAAGGATCCTACTATCAGCTTGTTTCATCCAGTTGCTGGAACGACAAATCTTTCGTCACTTCTCCCATCGCTGCACTGCATTTTGCAGCAGAACGACTTGCAGAGGGAAGAAATTATAAACTCAATCAAGCAACTGGAACAAATTTCTGGCAAGTACAGAGAGTCGGCCGAGGTACTTCCAGCATCCTCGAGGGAGAGAGAATTAAGGTCTTTGCTGATTCATCTGCATCATAGGGTCAGCAATCTAACTGAGGAACTATACAGCCAAAGACAAAAAAATGCCCAGTTAGAAAAAAAATTGAATGCTTCAGTATTCAAAGAGGAAATATTATGA | 1893 | 40.41 | MIRRVASGLPCLNTNQRKLIAANAPRKRYPVNSKYYKLYEVVGEGVSATVYRALCVPLNEIVAIKVLDLERCNNDLDVIHQEVKAMTLIDHTNVLQAHCSFTTDHYLWIVMPYMAGGSCLDIMKLAHPEGFEEPIIAFLLHEVLKALVYLHSHGHIHRDVKAGNILVHSNGAVKLADLGVSASTFDTGDRQRSRNAFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLHYERDKRFSKSFKEMVAACLVKDPKKRPKAKKLLKHPFFKQGHPNEYLVRTILDSLPPLENHFEMLKAKEAELLGQNKSLYDDKEQESQKGYIQGVSAWNFNLDDLKSQAALIQDAVGVNDRQNDEKDFGSHAERTSMEKLCCLNMTPSSEDVCHDHHDLESSVAPILLKHNGAVNNSYKLCEEDMNIANLREHMNIANGREDVNTANGREDINTGNGREDINTINPRVVDQEYRIDVDCTSSEPAAQLKGRFKVTSAGLGQKDPTISLFHPVAGTTNLSSLLPSLHCILQQNDLQREEIINSIKQLEQISGKYRESAEVLPASSRERELRSLLIHLHHRVSNLTEELYSQRQKNAQLEKKLNASVFKEEIL | 630 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 820812 | 828596 | - | evm.model.ptg000007l.143 | HCH9g0143 | 550775 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g0143 | 630 | FunFam | serine/threonine-protein kinase BLUS1 isoform X1 | 117 | 350 | - | - | |
HCH9g0143 | 630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 117 | 348 | - | - | |
HCH9g0143 | 630 | Pfam | Protein kinase domain | 36 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH9g0143 | 630 | CDD | STKc_OSR1_SPAK | 36 | 297 | - | - | |
HCH9g0143 | 630 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 27 | 616 | IPR047173 | GO:0043539(InterPro) | |
HCH9g0143 | 630 | Coils | Coil | 599 | 619 | - | - | |
HCH9g0143 | 630 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 339 | IPR011009 | - | |
HCH9g0143 | 630 | FunFam | Serine/threonine-protein kinase BLUS1 | 25 | 113 | - | - | |
HCH9g0143 | 630 | Gene3D | Phosphorylase Kinase; domain 1 | 25 | 112 | - | - | |
HCH9g0143 | 630 | ProSiteProfiles | Protein kinase domain profile. | 36 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH9g0143 | 630 | SMART | serkin_6 | 36 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH9g0143 | 630 | ProSitePatterns | Protein kinases ATP-binding region signature. | 42 | 65 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH6g0302 | HCH-Chr6:4435157 | HCH9g0143 | HCH-Chr9:820812 | 3.80E-137 | dispersed | |
HCH6g1181 | HCH-Chr6:46251093 | HCH9g0143 | HCH-Chr9:820812 | 2.90E-124 | dispersed | |
HCH7g1302 | HCH-Chr7:45928670 | HCH9g0143 | HCH-Chr9:820812 | 5.10E-85 | dispersed | |
HCH9g0143 | HCH-Chr9:820812 | HCH3g0225 | HCH-Chr3:1436069 | 3.30E-23 | dispersed | |
HCH13g0822 | HCH-Chr13:8095930 | HCH9g0143 | HCH-Chr9:820812 | 4.70E-193 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81743 | PF00069 | Pkinase | 2.00E-57 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH9g0143 | K08835 | - | mdm:103404327 | 677.937 |