Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0151 ATGAGAGAGAAGAGTGAAAGTGGTGGTGGGTATGTAAGAGCAGATCAGATAGATCTGAAAAGCTTAGATGAGCAGTTACAAAGACATCTAAGCAAAGCATGGACCATGGAAAAGAACAAGAAGAGGGAAGAAGAGGAAGATCATGAAGGAGCAAGAAGACCTTCAATTACAAGACAAGACTGGGAGATTGACCCTTCTAAACTCATCATCAAGACTGTCATAGCTCGTGGCACTTTTGGGACCGTTCATCGTGGAATTTATGATGGTTTAGATGTTGCTGTTAAACTTCTTGACTGGGGGGAAGAGGGTCATAGATCAGAGGCCGAAATTGCTTCTCTTAGAGCAGCTTTTACACAAGAAGTTGCTGTCTGGCACAAGCTTGACCATCCTAATGTAACTAAGTTTATAGGAGCAACACTGGGCTCATCAGATCTACACGTACAATCAGAAAATGGCCAAATTGACATGCCAAGCAATATTTGTTGTGTTATTGTTGAATATTGTCCTGGTGGTGCCTTGAAATCTTACCTCATAAAGAACAGGAGGAAAAAACTGGCTTTCAAAGTGGTTGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTGAGTTATCTTCATTCGCAGAAGATTGTTCACAGAGATGTCAAAACAGAAAACATGCTTCTGGACAAAACAAGAACAGTAAAAATTGCAGACTTTGGGGTTGCTCGTGTTGAGGCCTCAAATCCCAACGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAATAGAAAATGCGATGTGTATAGTTTTGGAATCTGTTTGTGGGAAATATACTGCTGTGATATGCCATATCCTGACCTTAGCTTCTCAGAAGTGACATCAGCTGTTGTTCGACAGAATCTGAGGCCGGAGATACCGCGTTGTTGCCCAAGCTCACTCGCTAATGTAATGAAGCGATGTTGGGATGCTAACCCGGACAAGCGGCCCGAGATGGACGAGGTGGTAACCATGTTGGAAGCCATTGACACATCAAAAGGTGGAGGCATGATCCCCCTCGATCAGTCTCAAGGTTGTTTATGTTTCCGCAAGTACCGGGGGCCTTAA 1116 43.91 MREKSESGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKKREEEEDHEGARRPSITRQDWEIDPSKLIIKTVIARGTFGTVHRGIYDGLDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATLGSSDLHVQSENGQIDMPSNICCVIVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCLCFRKYRGP 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 875802 879358 + evm.model.ptg000007l.151 HCH9g0151 550783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0151 371 Gene3D Phosphorylase Kinase; domain 1 55 150 - -
HCH9g0151 371 FunFam Serine/threonine-protein kinase HT1 168 353 - -
HCH9g0151 371 PRINTS Tyrosine kinase catalytic domain signature 165 178 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 PRINTS Tyrosine kinase catalytic domain signature 269 291 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 PRINTS Tyrosine kinase catalytic domain signature 203 221 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 CDD STKc_MAP3K-like 74 342 - -
HCH9g0151 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 FunFam Kinase suppressor of Ras 1 57 151 - -
HCH9g0151 371 SUPERFAMILY Protein kinase-like (PK-like) 51 342 IPR011009 -
HCH9g0151 371 Gene3D Transferase(Phosphotransferase) domain 1 168 358 - -
HCH9g0151 371 ProSiteProfiles Protein kinase domain profile. 68 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 48 343 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
HCH9g0151 371 SMART serkin_6 68 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 Pfam Protein tyrosine and serine/threonine kinase 70 342 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0151 371 MobiDBLite consensus disorder prediction 33 57 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH9g0151 HCH-Chr9:875802 HCH9g0516 HCH-Chr9:3311571 7.10E-42 dispersed
HCH4g1672 HCH-Chr4:17576049 HCH9g0151 HCH-Chr9:875802 1.90E-149 transposed
HCH7g1242 HCH-Chr7:45244153 HCH9g0151 HCH-Chr9:875802 5.60E-153 transposed
HCH3g0334 HCH-Chr3:2105615 HCH9g0151 HCH-Chr9:875802 1.90E-55 wgd
HCH8g1378 HCH-Chr8:48511990 HCH9g0151 HCH-Chr9:875802 3.20E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81744 PF07714 PK_Tyr_Ser-Thr 2.90E-64 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0151 - - - 0.0