Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0158 ATGGATCTAGAGAGTGTTATTGGTGGCCACCCAATCAAGAAAGATTCTTGGAGAGCTGTTTTAACTCTAGCATACCAGAGCTTAGGTGTTGTCTATGGAGATTTAAGTACTTCCCCTTTATATGTTTACAGAAGTACTTTTGCTGAAGATATTCAGCATTCTGAGAGTAATGAAGAGATTTATGGAGTCTTTTCTTTTGTATTCTGGACTCTTACTCTTGTGCCATTGATTAAATATGTGTTTATAGTCCTTCGTGCCGACGATAATGGCGAAGGCGGAACTTTCGCTCTTTATTCGTTACTATGTCGCCATGCCAGAGTTAGTTCCTTGCCTAATAACCAACTTGCAGATGAAGAACTTTCAGAATATACTAAAGATGGAGTTGATTCAATTACCAAGAACAATTGTGGGTCAAGGCTGAAATCTACTTTGGAAAAGCATAGAGTTTTGCAGAGAGTATTGCTTGTTCTTGCTCTTATTGGGGCTTGTATGGTAATTGGAGATGGAGTACTTACACCTGCAATTTCTGTTTTTTCTGCTGTTTCTGGGCTGGAGCTTTCCATGGCTAAAGAGCAACACAGATACGTTGAAGTCCCGGTCGCTTGTGTCATATTGGTTTTCCTGTTTGCCCTTCAACATTATGGAACTCACCGAGTTGGATTCTTGTTTGCACCGGTTGTAATTACTTGGCTCTTTTGCATCAGTGCCATAGGCGTGTACAATATCTTTCACTGGAATCCCCATGTTTATCAAGCAATCTCCCCTTATTATATGTATAAGTTTTTGAAAAAGACCCAAAGGGGAGGTTGGATGGCCCTGGGAGGAATCCTGTTATGTATGACAGGCTCGGAAGCGATGTTTGCTGATCTTGGGCACTTCTCACAGCTATCTATCCAGATTGCTTTCAGTTTTTTGGTTTATCCATCTCTAGTCCTTGCATACATGGGACAAGCTGCTTATCTTTCTAGACATCACGATATGGAAAATGGCCATCACATTGGATTTTACGTTTCGGTTCCTGAGAAAATAAGATGGCCTGTTCTTGCAATAGCCATTCTAGCTGCAGTGGTAGGGAGTCAAGCTGTCATCACCGGAACTTTCTCTATCATTAAACAATGCTCTGCTTTGGGTTGCTTCCCAAGGGTCAAAATTGTCCATACTTCTTCTAAAGTCCACGGTCAGATTTATATTCCGGAGATCAACTGGGCGTTGATGCTCTTATGCTTGGCTATTACCATTGGCTTTAGAGACACGAAACGCATGGGCAATGCATCGGGTTTAGCAGTGATAACTGTCATGCTGGTGACCACCTGCCTAATGTCTGTAGTCATCATCTTGTGCTGGCACAAAAGTTTCCTCCTGGCCATTGCCTTCATATTCTTTTTTGGATCCATTGAATCGCTTTACTTCTCAGCCTCGCTCATCAAATTCCGAGAAGGCGCTTGGGTTCCCATTGCACTTTCATTCATCTTTCTAATAGTCATGTACGTTTGGCATTATGGAACACGCAAGAAGTACGAGTTTGACGTCCAAAACAAAGTCTCCATCAATTGGCTTCTTAGTCTCGGTCCCAGTTTGGGAATCGTTCGGGTTCGAGGGATCGGCCTCATATATACTGAGCTTGTTGCAGGAATCCCAGCCATTTTCTCTCACTTTGTAACAAATCTCCCAGCCTTCCACCAGGTTGTAGTCTTCCTCTGCATCAAATCTGTCCCAGTCCCACATGTGAGACCAGGGGAAAGATTTTTAGTAGGGAGGGTCGGCCCAAAAGAGTATCGGCTCTACCGATGCATCGCACGGTACGGTTATCGGGACATCCACACAGATGATTTGGAGTTTGAAAAAGACCTTGTCTTCAGTATTGCTGAATTCATCAGATCAGAGAAGCCAGAAAGTAGTGTCAAACTCGAGGAAGAAGAAGAAGAAGCGACCGAAAGGATGACTGTCGTGGGGACATCGTCATCACATTTAGATGGTGTGAGAATGTGTGAAGATGAGGCAGAATTCTCTCAAAGTCAAATGGCAGGAACTTCAGAGTTGAGAGAAATAAAGTCACCTCAAAAACTGAGGAAAAGAGTGAGGTTTCTTCTGCCAGAAAGTCCACAAATAGACATGGATGCAAGAAAGGAGTTGCAGGAACTAATGGAAGCAAGAGAGGCAGGAATGGCATTTATAATGGGACACGCATATGTGAAAGCAAAGAGAGGGTCAGGCTGGCTAAAGAAGGTGGTGATAAATTTTGGGTATGATTTCTTGAGGAGAAACTCAAGAGGACCAACTTATGCTTGGAGTATTCCTCATGCATCTACATTAGAGGTGGGAATGATTTACCAAGTTTAG 2340 42.99 MDLESVIGGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYRSTFAEDIQHSESNEEIYGVFSFVFWTLTLVPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNNQLADEELSEYTKDGVDSITKNNCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEQHRYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVITWLFCISAIGVYNIFHWNPHVYQAISPYYMYKFLKKTQRGGWMALGGILLCMTGSEAMFADLGHFSQLSIQIAFSFLVYPSLVLAYMGQAAYLSRHHDMENGHHIGFYVSVPEKIRWPVLAIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKVHGQIYIPEINWALMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFLLAIAFIFFFGSIESLYFSASLIKFREGAWVPIALSFIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIYTELVAGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHTDDLEFEKDLVFSIAEFIRSEKPESSVKLEEEEEEATERMTVVGTSSSHLDGVRMCEDEAEFSQSQMAGTSELREIKSPQKLRKRVRFLLPESPQIDMDARKELQELMEAREAGMAFIMGHAYVKAKRGSGWLKKVVINFGYDFLRRNSRGPTYAWSIPHASTLEVGMIYQV 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 943132 948440 + evm.model.ptg000007l.158 HCH9g0158 550790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0158 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 779 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
HCH9g0158 779 Pfam K+ potassium transporter C-terminal domain 533 778 IPR053952 -
HCH9g0158 779 Pfam K+ potassium transporter integral membrane domain 23 520 IPR053951 -
HCH9g0158 779 NCBIfam potassium uptake protein 23 779 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0589 HCH-Chr13:4513494 HCH9g0158 HCH-Chr9:943132 6.50E-287 dispersed
HCH1g0295 HCH-Chr1:45994348 HCH9g0158 HCH-Chr9:943132 1.30E-290 dispersed
HCH3g1457 HCH-Chr3:52556885 HCH9g0158 HCH-Chr9:943132 3.00E-228 dispersed
HCH5g1145 HCH-Chr5:38196589 HCH9g0158 HCH-Chr9:943132 6.70E-178 dispersed
HCH9g0012 HCH-Chr9:101601 HCH9g0158 HCH-Chr9:943132 1.30E-258 dispersed
HCH1g1017 HCH-Chr1:58176627 HCH9g0158 HCH-Chr9:943132 0.00E+00 wgd
HCH13g0807 HCH-Chr13:7797032 HCH9g0158 HCH-Chr9:943132 0.00E+00 wgd
HCH4g0006 HCH-Chr4:63819 HCH9g0158 HCH-Chr9:943132 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0158 K03549 - csv:101211664 1361.67