Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0164 ATGGAAAGAAATTGGTTTTACAAAGAGGTGGTGCCATTTGGGGGGATGGTAGTAGCAGAATGCGCCAACGTTGGATCAAATACAATATTCAAAGCAGCGAGGGGACAAGGCATCAGCTACTATGTCTTCACTGTCTACGTTTCCATTGCTGCCTCTCTCTTTACCCTTCCTTTTGCTTTCATTTTTCGCAGATCACCAGAGCTTCCTTCCAACAAGATATCTTTCTTCCTCAAACTTGTCTCCCTCTCAGCTATTGGGCTTTCAAGTCAATTACTTGGATACAAAGGGCTTGATTACAGTTCTCCAACACTTTCTTCCGCCATTAGTAACCTCATCCCAGCTTTCACTTTCATTCTCGCACTTCTTTTTCGGATGGAAAAGGTAGATTTGAAAAGGTCAAGCAGTATAGTAAAAATCATGGGGACTATAGTGTCAATATCAGGGGCATTGGTAGTGGTTTTATATAAAGGCCCAGTTGTCTTTTCAAACCAATATAATCAATTGCCTTTGCTCTCTCCCTCCTCACAATCAAATTGGATCTTGGGTAGCATTTGCTTTCTTCTTCAATACCTTTTCAACTCTCTCTGGTATATTCTTCAGACACATATGCTGAGAATATACCCAGATGAGCTAGTAATGGTGGCAATGTACTTCGCTACCGTGACCATATTATCTACGCCTATTTGTCTCTTTGCTGAATCAGACATTACTGCTTGGAAACTAAAAACTGAATTGAGTTTTCTTGCAGTTTTAAACTCGGGATGTATCGGTCAATCATTTGTCACTGCAATCCACACATGGGGTCTGCACTTGAAAGGCCCTGTTTATGTTTCAAGTTTCAGGCCACTTTCTATTGCTATTGCTGCTGCTATGAGTACCTCTCTCCTTGGTGATAATCTTTATCTTGGAAGCGTTATTGGAGCAATTATAATATCAACTGGTTTCTATGCCATAATGTGGGGAAAGGCAAAAGAAGAAGATTTATTGAAGGAACCATGGGATTATTGTAGCTTGGAATCTTCTTCATCCACTGGTAAAACTCCATTGCTGCAATAA 1056 40.44 MERNWFYKEVVPFGGMVVAECANVGSNTIFKAARGQGISYYVFTVYVSIAASLFTLPFAFIFRRSPELPSNKISFFLKLVSLSAIGLSSQLLGYKGLDYSSPTLSSAISNLIPAFTFILALLFRMEKVDLKRSSSIVKIMGTIVSISGALVVVLYKGPVVFSNQYNQLPLLSPSSQSNWILGSICFLLQYLFNSLWYILQTHMLRIYPDELVMVAMYFATVTILSTPICLFAESDITAWKLKTELSFLAVLNSGCIGQSFVTAIHTWGLHLKGPVYVSSFRPLSIAIAAAMSTSLLGDNLYLGSVIGAIIISTGFYAIMWGKAKEEDLLKEPWDYCSLESSSSTGKTPLLQ 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 979713 983091 + evm.model.ptg000007l.164 HCH9g0164 550796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0164 351 Pfam EamA-like transporter family 24 152 IPR000620 GO:0016020(InterPro)
HCH9g0164 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
HCH9g0164 351 PANTHER WAT1-RELATED PROTEIN 16 336 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0800 HCH-Chr13:7710544 HCH9g0164 HCH-Chr9:979713 6.00E-89 dispersed
HCH4g0002 HCH-Chr4:37452 HCH9g0164 HCH-Chr9:979713 2.10E-64 dispersed
HCH9g0162 HCH-Chr9:968636 HCH9g0164 HCH-Chr9:979713 3.70E-120 dispersed
HCH9g0164 HCH-Chr9:979713 HCH9g0974 HCH-Chr9:7272502 8.70E-42 dispersed
HCH9g0163 HCH-Chr9:973279 HCH9g0164 HCH-Chr9:979713 2.10E-118 tandem
HCH9g0164 HCH-Chr9:979713 HCH9g0165 HCH-Chr9:984966 3.00E-98 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0164 - - - 0.0