Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g0266 | ATGGAGGGACTAAAAAGAAGGCTTACTGGTGGTGGGTCGTCGGCAATGACGGTGGCGGTGACGGTGGCGGTGGTGGTTCTGTGTGGTTTGGTGATGGAAGTTTCAGCAACTAAATGGACTGTGGGAGGAAACATGGGATGGAATACTAATGTTAATTATACTATCTGGGCTCAAGACAAGCACTTTTATTATGATGATTGGCTTTTTTTTGTGTATGACAGGAACCAAATGAATATTTTGGAAGTGAACAAGACAGACTATGAGGCTTGCAATTCTGATCACCCACTTCACAATTATACCACAGGAGCTGGAAGAGATGTGGTGCATTTGAATGTGACCAGGCCATATTACTTCATAAGCGGCAAAGGGTTCTGCTTTGGAGGCATGAAGCTAGCTATTCAGGTCGAACACCTACCTCCCCCGCCCTCTTCTTCCCCTTTGAACGAGAAGAGTAGCGCCCCGAGTTCTAGTCACATTAGCCACTTGCACATCATTTTAATAGGTGCTCTCGCCATTGGCGCTCTATGGGAAGCGTTCGTTCAGATTCGGTAG | 552 | 46.56 | MEGLKRRLTGGGSSAMTVAVTVAVVVLCGLVMEVSATKWTVGGNMGWNTNVNYTIWAQDKHFYYDDWLFFVYDRNQMNILEVNKTDYEACNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCFGGMKLAIQVEHLPPPPSSSPLNEKSSAPSSSHISHLHIILIGALAIGALWEAFVQIR | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1655212 | 1656763 | - | evm.model.ptg000007l.266 | HCH9g0266 | 550898 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g0266 | 183 | SUPERFAMILY | Cupredoxins | 36 | 135 | IPR008972 | - | |
| HCH9g0266 | 183 | Gene3D | - | 35 | 138 | IPR008972 | - | |
| HCH9g0266 | 183 | FunFam | Lamin-like protein | 35 | 138 | - | - | |
| HCH9g0266 | 183 | Pfam | Plastocyanin-like domain | 47 | 129 | IPR003245 | GO:0009055(InterPro) | |
| HCH9g0266 | 183 | ProSiteProfiles | Phytocyanin domain profile. | 37 | 137 | IPR003245 | GO:0009055(InterPro) | |
| HCH9g0266 | 183 | PANTHER | BLUE COPPER PROTEIN | 25 | 142 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH9g0265 | HCH-Chr9:1652830 | HCH9g0266 | HCH-Chr9:1655212 | 3.40E-28 | tandem |
Pathway information