Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH9g0347 | ATGTCGCCTGTTGATTCTTCGCGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCCGAAAGGTATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCAAAGACTGTGGATGTTGAGGAGTTGACTGTTGAAGAAAGGAATCTCCTCTCTGTCGCTTATAAGAATGTCATTGGAGCTCGGAGGGCTTCATGGAGGATTATTTCTTCTATTGAGCAGAAGGAGGAGAGTCGGGGAAATGAGGACCACGTTGTTATTATCAAGGAATACCGGAGCAAGATCGAAACAGAGCTGAGCAAGATCTGTGACGGGATTTTGAGCTTACTTGAATCTCATCTCATCCCGTCAGCCTCATCTGCTGAATCTAAGGTGTTTTATCTCAAAATGAAGGGGGATTACCATAGGTATCTGGCTGAGTTCAAGACTGGAGCTGAGAGGAAGGAAGCGGCTGAGAGCACTTTACTAGCCTATAAGTCTGCTCAGGATATTGCACTTGCCGATTTGGCTCCTACTCATCCAATTAGGCTCGGACTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCACCAGATCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGATGAAGCCATTTCTGAGCTCGACACTCTAGGTGAAGAATCATACAAGGACAGTACCTTGATCATGCAACTCCTCCGAGACAATTTGACCCTTTGGACTTCTGATATAACGGATGATGCTGGGGATGAGATTAAGGAAGCATCAAAACGTGAATCAGGGGATGGACAGTAG | 786 | 45.17 | MSPVDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVVIIKEYRSKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEASKRESGDGQ | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2161383 | 2163099 | + | evm.model.ptg000007l.347 | HCH9g0347 | 550979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH9g0347 | 261 | PANTHER | 14-3-3 PROTEIN | 7 | 243 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
HCH9g0347 | 261 | SMART | 1433_4 | 8 | 251 | IPR023410 | - | |
HCH9g0347 | 261 | PIRSF | 14-3-3 | 3 | 250 | IPR000308 | - | |
HCH9g0347 | 261 | Pfam | 14-3-3 protein | 14 | 238 | IPR023410 | - | |
HCH9g0347 | 261 | ProSitePatterns | 14-3-3 proteins signature 1. | 48 | 58 | IPR023409 | - | |
HCH9g0347 | 261 | ProSitePatterns | 14-3-3 proteins signature 2. | 220 | 239 | IPR023409 | - | |
HCH9g0347 | 261 | Gene3D | - | 2 | 251 | IPR036815 | - | |
HCH9g0347 | 261 | PRINTS | 14-3-3 protein zeta signature | 184 | 210 | IPR000308 | - | |
HCH9g0347 | 261 | PRINTS | 14-3-3 protein zeta signature | 122 | 144 | IPR000308 | - | |
HCH9g0347 | 261 | PRINTS | 14-3-3 protein zeta signature | 157 | 183 | IPR000308 | - | |
HCH9g0347 | 261 | PRINTS | 14-3-3 protein zeta signature | 211 | 240 | IPR000308 | - | |
HCH9g0347 | 261 | PRINTS | 14-3-3 protein zeta signature | 42 | 71 | IPR000308 | - | |
HCH9g0347 | 261 | PRINTS | 14-3-3 protein zeta signature | 91 | 115 | IPR000308 | - | |
HCH9g0347 | 261 | SUPERFAMILY | 14-3-3 protein | 7 | 240 | IPR036815 | - | |
HCH9g0347 | 261 | Coils | Coil | 14 | 34 | - | - | |
HCH9g0347 | 261 | FunFam | 14-3-3 protein epsilon | 4 | 251 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g0248 | HCH-Chr12:1376281 | HCH9g0347 | HCH-Chr9:2161383 | 3.30E-118 | dispersed | |
HCH12g0689 | HCH-Chr12:4217141 | HCH9g0347 | HCH-Chr9:2161383 | 4.90E-103 | dispersed | |
HCH4g0290 | HCH-Chr4:1864433 | HCH9g0347 | HCH-Chr9:2161383 | 1.10E-102 | dispersed | |
HCH7g0108 | HCH-Chr7:670533 | HCH9g0347 | HCH-Chr9:2161383 | 1.20E-93 | dispersed | |
HCH9g0347 | HCH-Chr9:2161383 | HCH4g0229 | HCH-Chr4:1363839 | 2.90E-119 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH9g0347 | K06630 | - | rcu:8261199 | 496.123 |