Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0356 ATGGCGGCGGCTCAAGGTGATCGGCTCCGTCCAGTTTCAACGTTTACAGGTCTCGATATTGCCGTCGATGAGGATTCCAAGCCTTTGATTTCTAGGATCATTGGATATCCAATCGGAATTATTCACCACCAATTGCGCCGCCGTTTCGGCGCTGCCAAGCCACGAACGCCACGGCGTCAGCAATCTTTAAGTCGAGAAATTGGACATGCTGCCAAGGAAACCGTGATTATTACTCGGCTGAATTTCACTCTCCTTCGATCTCTAGGGATAGGATATCGGTGGATTGCGAGAGTAGCTGCCCTTGCTGTGTATGCCATTCTGCTCTTGCCTGGTTTTCTTAGAGTTATGTATGATTATTTCTTCTCGAGCCTAGTTCGGAGGGATATTATATATGGAGATCAACCAAGAAATAGGTTGGATTTGTATTTACCCATAAATACTGATAAAGAAAAACCAGTTGCAATATTTGTTAGTGGTGGAGCTTGGATTATCGGGTACAAAGCATGGGGGGCTTTTTTAGGACTGCTGTTGGCAGAGAGAGATATTATTGTAGCCTCAATTGACTATAGAAACTTTCCTCAAGGTACAATCAGTGACATGGTAAAAGATGTTTCTCAAGGGATTTCATTTGTTTGTAACAATATAGCGGACTATGGAGGAGATCCTAACAGAATCTTTCTAATGGGACAATCAGCTGGTGCACATATTTCGGCTTGTGCCCTCTTGGAGCAAGCAATCAAAGAATCTAGGAAAGAAGAGAGTGTATGTTGGAGTGTCTCTCAAATGAAAGCTTACTTCGGTTTATCTGGAGGGTATAACTTGTTGAATCTAGTTGATCACTTCAATAGTCGGGGTCTATATCGTTCCGTCTTTTTGAGCATTATGGAAGGTGAACAATCTTTATCTCAATTTTCCCCTGAAGTAAGAATCCAAGATCCCAGCAATAGAGATGTCGTGTCTCGCTTACCACCTTTTGTTCTTTTCCATGGCACTGCTGATTATTCAATTCCTTCAGATGCCAGCAAAAATTTCGTGGACACTCTTCGAAATGCTGGAGCACAAGCTGACCTTTTTCTCTACGAGGGGAAAACTCATACAGATGTGTTCCTTCATGATCCTTTTAGGGGAGGCAATTATGAACTTTTTGATCAGATGGTTGCATTAATACATGCTGGAGACGAGGAAGCTCTTGCAAAGGATTCTATGGCACCTCCAAAACGACGCCTTGTTCCCGAGTTTTTGATAAGATTGGCACGAATGGTCAGCCCTTTCTGA 1275 43.06 MAAAQGDRLRPVSTFTGLDIAVDEDSKPLISRIIGYPIGIIHHQLRRRFGAAKPRTPRRQQSLSREIGHAAKETVIITRLNFTLLRSLGIGYRWIARVAALAVYAILLLPGFLRVMYDYFFSSLVRRDIIYGDQPRNRLDLYLPINTDKEKPVAIFVSGGAWIIGYKAWGAFLGLLLAERDIIVASIDYRNFPQGTISDMVKDVSQGISFVCNNIADYGGDPNRIFLMGQSAGAHISACALLEQAIKESRKEESVCWSVSQMKAYFGLSGGYNLLNLVDHFNSRGLYRSVFLSIMEGEQSLSQFSPEVRIQDPSNRDVVSRLPPFVLFHGTADYSIPSDASKNFVDTLRNAGAQADLFLYEGKTHTDVFLHDPFRGGNYELFDQMVALIHAGDEEALAKDSMAPPKRRLVPEFLIRLARMVSPF 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2211930 2216198 - evm.model.ptg000007l.356 HCH9g0356 550988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0356 424 Gene3D alpha/beta hydrolase 121 372 IPR029058 -
HCH9g0356 424 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 121 373 - -
HCH9g0356 424 SUPERFAMILY alpha/beta-Hydrolases 111 377 IPR029058 -
HCH9g0356 424 Pfam BD-FAE 139 348 IPR049492 -
HCH9g0356 424 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 64 389 IPR050300 GO:0016298(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0819 HCH-Chr1:56840627 HCH9g0356 HCH-Chr9:2211930 1.30E-138 dispersed
HCH9g0356 HCH-Chr9:2211930 HCH10g1224 HCH-Chr10:43470546 1.20E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0356 K15889 - mdm:103442493 603.979