Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0365 ATGACCATTTTAACGACACTTTTCGTTATCTTACTTTCTTTACTTGCAAAAATAGCGTATGACACTTTCTCATGCTACTGGCTAATCCCAAGACGCATCAGGAAGATCATGGCTGCCCAAGGTGTCCATGGCCCCAACCCCCGCCCTCTCGTCGGAAACCTCCTCGACATCGCTTCCTTCCTCTCCAAATCCACCGCCCCCCACATGGACTCCATCAACCACGACATCGTCGGCCGCCTTTTGCCCCATTACCTTGCCTGGTCCAAACAATACGGGAAAAGATTTATATACTGGCATGGGACCGAGCCAAGGATGTGTTTGACAGAGACGGAATTGATAAAAGAATTGCTGTCAAAATACAGCACGATTTGTGGGAAATCGTGGCTGCAACAACAAGGGTCCAAACACTTCATAGGGAAAGGATTATTGATGGCAAACGGTGAAGATTGGTATCACCAGCGTCACATCGTTGCTCCTGTGTTCATGGGAGACAAACTCAAGAGCTATGCGGGATACATGGTGGAATGCACAAGGACCATGATCAAATCCCTTCAAACTGAGTTAAACTCCGGCCGGACCGAGTTTGAGATCTCCGATTACATGAAGAAACTGACCGCCGAGATAATCTCAAGGACGGAATTCGACACAAGCTACGACAAAGGCAAACAAATCTTCCATTTACTAACTGTTCTTCAACATCTATGTGCTCAAGCCAGCCGCCACCTTTGCGTTCCAGGCAGCCGGTTTTTCCCAACTAAATATAATAGACAGATTAAGTCATTGAAAATGGAGGTTGAGAGGCTGTTAATGGAGATTATCCAGAGTAGAAAAGATTGTGTGGAGATTGGAAGAAGCAATTCTTATGGAAATGATTTGCTGGGAATGCTTTTGAATGAGATGCAGAATAGAAAAGGAGATCAAAATGGATTTAGTTTGAATTTGCAAGTTATAATGGATGAATGCAAGACTTTCTTCTTTGCTGGGCATGATACGACAGCCTTGTTGCTTACTTGGACGATCATGTTGTTGGCGAGTAACCCTAATTGGCAAGACAAGGTTCGCGAGGAAGTGAAGAAGGTCTGTAATGGTGGAATTCCTTCTGTTGATCATCTCTCTAAGCTCACTTTGCTAAATATGGTAATAAATGAATCACTAAGGCTTTATCCACCAGCCACATTGCTCCCAAGAATGGCTTTTGAAGATATAAAACTTGGAGAAATGAACATCCCTAAAGGGCTATCGATATGGATCCCGGTGCTCGCCATTCATCACAGCGAAGAGTTATGGGGAAAAGACGCAAATGAATTTAAACCAGAAAGATTTGCTTCGAAATCATTCAATGCAGGGCGTTTCATTCCATTTGCAGCAGGACCAAGAAACTGCATTGGCCAATCTTTTGCAATCATGGAAGCTAAGATCATTTTGGCTTTGTTGATATCTAGCTTTCGTTTCACTATTTCAGATAATTATCGCCATGCACCTGTTACTGTTCTTACTATACAGCCTAAATATGGGGTTCAAGTTTGCTTGAAGCCATTAGATTCTTGA 1548 43.28 MTILTTLFVILLSLLAKIAYDTFSCYWLIPRRIRKIMAAQGVHGPNPRPLVGNLLDIASFLSKSTAPHMDSINHDIVGRLLPHYLAWSKQYGKRFIYWHGTEPRMCLTETELIKELLSKYSTICGKSWLQQQGSKHFIGKGLLMANGEDWYHQRHIVAPVFMGDKLKSYAGYMVECTRTMIKSLQTELNSGRTEFEISDYMKKLTAEIISRTEFDTSYDKGKQIFHLLTVLQHLCAQASRHLCVPGSRFFPTKYNRQIKSLKMEVERLLMEIIQSRKDCVEIGRSNSYGNDLLGMLLNEMQNRKGDQNGFSLNLQVIMDECKTFFFAGHDTTALLLTWTIMLLASNPNWQDKVREEVKKVCNGGIPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGEMNIPKGLSIWIPVLAIHHSEELWGKDANEFKPERFASKSFNAGRFIPFAAGPRNCIGQSFAIMEAKIILALLISSFRFTISDNYRHAPVTVLTIQPKYGVQVCLKPLDS 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 2261358 2265085 + evm.model.ptg000007l.365 HCH9g0365 550997
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0365 515 SUPERFAMILY Cytochrome P450 44 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 506 IPR050665 GO:0004497(PANTHER)
HCH9g0365 515 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 Gene3D Cytochrome P450 26 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 CDD CYP72_clan 81 507 - -
HCH9g0365 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH9g0365 515 Coils Coil 258 278 - -
HCH9g0365 515 Pfam Cytochrome P450 87 488 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1227 HCH-Chr11:44499112 HCH9g0365 HCH-Chr9:2261358 6.90E-91 dispersed
HCH5g0810 HCH-Chr5:6340829 HCH9g0365 HCH-Chr9:2261358 2.30E-86 dispersed
HCH8g0803 HCH-Chr8:44636767 HCH9g0365 HCH-Chr9:2261358 4.00E-91 dispersed
HCH9g0365 HCH-Chr9:2261358 HCH9g0863 HCH-Chr9:6169169 3.80E-94 dispersed
HCH9g0539 HCH-Chr9:3472918 HCH9g0365 HCH-Chr9:2261358 1.10E-36 transposed
HCH13g0615 HCH-Chr13:4703167 HCH9g0365 HCH-Chr9:2261358 3.80E-243 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0365 K10717 - mdm:103442522 868.996