Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g0365 | ATGACCATTTTAACGACACTTTTCGTTATCTTACTTTCTTTACTTGCAAAAATAGCGTATGACACTTTCTCATGCTACTGGCTAATCCCAAGACGCATCAGGAAGATCATGGCTGCCCAAGGTGTCCATGGCCCCAACCCCCGCCCTCTCGTCGGAAACCTCCTCGACATCGCTTCCTTCCTCTCCAAATCCACCGCCCCCCACATGGACTCCATCAACCACGACATCGTCGGCCGCCTTTTGCCCCATTACCTTGCCTGGTCCAAACAATACGGGAAAAGATTTATATACTGGCATGGGACCGAGCCAAGGATGTGTTTGACAGAGACGGAATTGATAAAAGAATTGCTGTCAAAATACAGCACGATTTGTGGGAAATCGTGGCTGCAACAACAAGGGTCCAAACACTTCATAGGGAAAGGATTATTGATGGCAAACGGTGAAGATTGGTATCACCAGCGTCACATCGTTGCTCCTGTGTTCATGGGAGACAAACTCAAGAGCTATGCGGGATACATGGTGGAATGCACAAGGACCATGATCAAATCCCTTCAAACTGAGTTAAACTCCGGCCGGACCGAGTTTGAGATCTCCGATTACATGAAGAAACTGACCGCCGAGATAATCTCAAGGACGGAATTCGACACAAGCTACGACAAAGGCAAACAAATCTTCCATTTACTAACTGTTCTTCAACATCTATGTGCTCAAGCCAGCCGCCACCTTTGCGTTCCAGGCAGCCGGTTTTTCCCAACTAAATATAATAGACAGATTAAGTCATTGAAAATGGAGGTTGAGAGGCTGTTAATGGAGATTATCCAGAGTAGAAAAGATTGTGTGGAGATTGGAAGAAGCAATTCTTATGGAAATGATTTGCTGGGAATGCTTTTGAATGAGATGCAGAATAGAAAAGGAGATCAAAATGGATTTAGTTTGAATTTGCAAGTTATAATGGATGAATGCAAGACTTTCTTCTTTGCTGGGCATGATACGACAGCCTTGTTGCTTACTTGGACGATCATGTTGTTGGCGAGTAACCCTAATTGGCAAGACAAGGTTCGCGAGGAAGTGAAGAAGGTCTGTAATGGTGGAATTCCTTCTGTTGATCATCTCTCTAAGCTCACTTTGCTAAATATGGTAATAAATGAATCACTAAGGCTTTATCCACCAGCCACATTGCTCCCAAGAATGGCTTTTGAAGATATAAAACTTGGAGAAATGAACATCCCTAAAGGGCTATCGATATGGATCCCGGTGCTCGCCATTCATCACAGCGAAGAGTTATGGGGAAAAGACGCAAATGAATTTAAACCAGAAAGATTTGCTTCGAAATCATTCAATGCAGGGCGTTTCATTCCATTTGCAGCAGGACCAAGAAACTGCATTGGCCAATCTTTTGCAATCATGGAAGCTAAGATCATTTTGGCTTTGTTGATATCTAGCTTTCGTTTCACTATTTCAGATAATTATCGCCATGCACCTGTTACTGTTCTTACTATACAGCCTAAATATGGGGTTCAAGTTTGCTTGAAGCCATTAGATTCTTGA | 1548 | 43.28 | MTILTTLFVILLSLLAKIAYDTFSCYWLIPRRIRKIMAAQGVHGPNPRPLVGNLLDIASFLSKSTAPHMDSINHDIVGRLLPHYLAWSKQYGKRFIYWHGTEPRMCLTETELIKELLSKYSTICGKSWLQQQGSKHFIGKGLLMANGEDWYHQRHIVAPVFMGDKLKSYAGYMVECTRTMIKSLQTELNSGRTEFEISDYMKKLTAEIISRTEFDTSYDKGKQIFHLLTVLQHLCAQASRHLCVPGSRFFPTKYNRQIKSLKMEVERLLMEIIQSRKDCVEIGRSNSYGNDLLGMLLNEMQNRKGDQNGFSLNLQVIMDECKTFFFAGHDTTALLLTWTIMLLASNPNWQDKVREEVKKVCNGGIPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGEMNIPKGLSIWIPVLAIHHSEELWGKDANEFKPERFASKSFNAGRFIPFAAGPRNCIGQSFAIMEAKIILALLISSFRFTISDNYRHAPVTVLTIQPKYGVQVCLKPLDS | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 2261358 | 2265085 | + | evm.model.ptg000007l.365 | HCH9g0365 | 550997 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g0365 | 515 | SUPERFAMILY | Cytochrome P450 | 44 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 8 | 506 | IPR050665 | GO:0004497(PANTHER) | |
| HCH9g0365 | 515 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | E-class P450 group I signature | 88 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | Gene3D | Cytochrome P450 | 26 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | CDD | CYP72_clan | 81 | 507 | - | - | |
| HCH9g0365 | 515 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH9g0365 | 515 | Coils | Coil | 258 | 278 | - | - | |
| HCH9g0365 | 515 | Pfam | Cytochrome P450 | 87 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH11g1227 | HCH-Chr11:44499112 | HCH9g0365 | HCH-Chr9:2261358 | 6.90E-91 | dispersed | |
| HCH5g0810 | HCH-Chr5:6340829 | HCH9g0365 | HCH-Chr9:2261358 | 2.30E-86 | dispersed | |
| HCH8g0803 | HCH-Chr8:44636767 | HCH9g0365 | HCH-Chr9:2261358 | 4.00E-91 | dispersed | |
| HCH9g0365 | HCH-Chr9:2261358 | HCH9g0863 | HCH-Chr9:6169169 | 3.80E-94 | dispersed | |
| HCH9g0539 | HCH-Chr9:3472918 | HCH9g0365 | HCH-Chr9:2261358 | 1.10E-36 | transposed | |
| HCH13g0615 | HCH-Chr13:4703167 | HCH9g0365 | HCH-Chr9:2261358 | 3.80E-243 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH9g0365 | K10717 | - | mdm:103442522 | 868.996 |