Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH9g0381 ATGAACCAATTCCCATTGGTCTCCAAGAATTTTTCCCTGGAAATGAATTCCAGGATTTCCCTCGTTTTCATTTCATGGGTTTTGGTTTTCGAGATTCCTTCCTCTTCAAGCCCCATCGATTGGTACACAATCTGCAGCACCCATAAATTCAACTGCGGGAATATCACCAACATCGGGTTTCCATTCTGGGGCGGAGACCGACCCGAGAGATGCGGGCACCCCGCTCTAAAAATGGTCTGCGAAGGAAACGTGGAGGCAACAATAGAAATAAAGGGAGTGAAATATAAAGTAATGGAAATGAATAGAGAATCTAAAACAGTAAGAATCGCAAGAAGCGATTACATGGAGAATCTCTGCCCCACAAAATTCATAAACACGAGTATCGATTACAATCTATTTGAATCAATAAATGGATACTCCAATATCACTCTTTTATATTGCTCCTCCTCCACAACAGCAGGACAATTTAGCTGCCCCAATTATGGTATTGGGTTAATGGAAATCGGCGCTATCGGGCCCAGGCTCTGCAACGAAAGCGTGATCATGCCCGTTTCTTTCTCGGGTATGAGCGGCGTCGTGAATTCGACGGAGATATTAGCGGCGATTAAAGAAGGATTTGAGGTTAAATGGAAGGATGAAAGAGAACGAGGATGTGGGGATTGTGAAGAATCAAAAGGGGTTTGTGGTTATGATTTCACTTTGAATCAAACGACTTGCTATTGTCGTGGCTATTCTACCGGTTATAGAATCTGTCCTGCTCCCCCCGGCGCCAGAGCTCCGTCCGGGGCTTCGCCGGGTAGGAATGGACCTAAAAGATCACGCCTCATTATAGGCCTTGTTATAGGTGGGGCTGGTATATTAGGCTTATTCCTAGGATACTTGATCTTTCATATTTCGTGCCGAAGGAAGAAACATATGATGAAGTTGAAAAGTATAGATCTTTCTTTATCTCCTTCAAGTGCAGACATTCCGACTCCCTCTACTTTTCTCTCTCGCAGCATTCCTTCCTTTCCTTATTCAAGATCTGATCTTGAGAAGGGGAGCTCCTACTTTGGTGCTCAAGTCTTTACCTATACTGAACTTGAGAAAGCAACTAGTAATTTCGACCGCTCGAGGGAACTTGGAGATGGAGGTTACGGTACTGTTTACGCTGGGAAACTTCATGATGGACGCATAGTTGCAGTAAAGCGCCTGTATGAAAACAATTATAAACGTGTTGAGCAGTTCATGAATGAAGTAGAGATTCTATCACAATTGCAACACCCAAACCTGGTGAAGCTTTATGGTTGCACGTCAAGACATAGTCAGGAACTCCTCCTGGTATATGAATATATTCCTAATGGAACAGTGGCTGATCATCTACATGGGAAGCAAGCAAATTCAGGTTTGCTCAGCTGGTCTGTTCGGTTGAGAATTGCGATAGAGACAGCTACTGCACTAGCCTACCTCCACCGCAAAGATATTATTCACCGTGATGTCAAAACCAATAACATTCTTCTAGATAACAACTTTCAAGTAAAAGTGGCTGATTTTGGTCTATCACGATTATTCCCCAATGATGTTACTCATGTTTCAACTGCTCCACAGGGGACACCTGGCTATGTTGATCCTGAATATTATCAGTGTTACCAACTTACTAACAAAAGTGATGTCTACAGCTTCGGAGTGGTTCTGGTTGAGCTTATATCATCGTTACAAGCAGTAGACATCAACAGGAACAGGAATGATATTAATTTGTGTAATATGGCTGTCAATAGAATTCAAAATCATGCATTACATGAGTTGGTAGATCCAAATATTGGGTTTGAGAGGGACTACGCAGTAAGGTGTATGATAACATCAGTGGCAGAGTTAGCTTTTCGATGTCTACAACAGGCACTGATTCTGAGGCCTTCTATGGATGAAGTGCTTGATGTTTTGAGAGGAATAGAGAATGAAGAATTGGGTGCTCGTAAAGCTGAAGTGTTAGATATAGGTTCAGATGATGTGAGACTTTTAAGATGA 2004 42.51 MNQFPLVSKNFSLEMNSRISLVFISWVLVFEIPSSSSPIDWYTICSTHKFNCGNITNIGFPFWGGDRPERCGHPALKMVCEGNVEATIEIKGVKYKVMEMNRESKTVRIARSDYMENLCPTKFINTSIDYNLFESINGYSNITLLYCSSSTTAGQFSCPNYGIGLMEIGAIGPRLCNESVIMPVSFSGMSGVVNSTEILAAIKEGFEVKWKDERERGCGDCEESKGVCGYDFTLNQTTCYCRGYSTGYRICPAPPGARAPSGASPGRNGPKRSRLIIGLVIGGAGILGLFLGYLIFHISCRRKKHMMKLKSIDLSLSPSSADIPTPSTFLSRSIPSFPYSRSDLEKGSSYFGAQVFTYTELEKATSNFDRSRELGDGGYGTVYAGKLHDGRIVAVKRLYENNYKRVEQFMNEVEILSQLQHPNLVKLYGCTSRHSQELLLVYEYIPNGTVADHLHGKQANSGLLSWSVRLRIAIETATALAYLHRKDIIHRDVKTNNILLDNNFQVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTNKSDVYSFGVVLVELISSLQAVDINRNRNDINLCNMAVNRIQNHALHELVDPNIGFERDYAVRCMITSVAELAFRCLQQALILRPSMDEVLDVLRGIENEELGARKAEVLDIGSDDVRLLR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2423616 2427968 - evm.model.ptg000007l.381 HCH9g0381 551013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH9g0381 667 Gene3D Transferase(Phosphotransferase) domain 1 445 655 - -
HCH9g0381 667 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 345 444 - -
HCH9g0381 667 Gene3D Phosphorylase Kinase; domain 1 341 444 - -
HCH9g0381 667 Pfam Wall-associated receptor kinase galacturonan-binding 45 111 IPR025287 GO:0030247(InterPro)
HCH9g0381 667 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 42 663 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
HCH9g0381 667 SMART serkin_6 368 640 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0381 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH9g0381 667 Pfam Protein kinase domain 369 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0381 667 Pfam Wall-associated receptor kinase C-terminal 174 242 IPR032872 -
HCH9g0381 667 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524(InterPro)
HCH9g0381 667 SUPERFAMILY Protein kinase-like (PK-like) 349 643 IPR011009 -
HCH9g0381 667 ProSiteProfiles Protein kinase domain profile. 368 648 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH9g0381 667 FunFam Wall-associated receptor kinase-like 20 445 653 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0233 HCH-Chr14:29483462 HCH9g0381 HCH-Chr9:2423616 4.70E-79 dispersed
HCH1g0750 HCH-Chr1:56301404 HCH9g0381 HCH-Chr9:2423616 1.80E-13 dispersed
HCH3g0187 HCH-Chr3:1197687 HCH9g0381 HCH-Chr9:2423616 2.10E-153 dispersed
HCH4g0685 HCH-Chr4:4455595 HCH9g0381 HCH-Chr9:2423616 1.90E-77 dispersed
HCH8g0250 HCH-Chr8:12147059 HCH9g0381 HCH-Chr9:2423616 5.50E-66 dispersed
HCH9g0381 HCH-Chr9:2423616 HCH1g1112 HCH-Chr1:58734409 3.80E-62 dispersed
HCH9g0381 HCH-Chr9:2423616 HCH9g0382 HCH-Chr9:2429794 4.20E-46 tandem
HCH1g0970 HCH-Chr1:57875108 HCH9g0381 HCH-Chr9:2423616 2.90E-75 transposed
HCH1g0749 HCH-Chr1:56295597 HCH9g0381 HCH-Chr9:2423616 9.60E-127 wgd
HCH3g0186 HCH-Chr3:1194566 HCH9g0381 HCH-Chr9:2423616 4.30E-55 wgd
HCH8g1155 HCH-Chr8:47169559 HCH9g0381 HCH-Chr9:2423616 2.60E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81752 PF00069 Pkinase 1.30E-49 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH9g0381 - - - 0.0