Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH9g0420 | ATGGAGAATTTCATGGGCCTGCTTAGAATTCACATCTCTAGAGGAATCAATCTTGCTATAAGAGATGTTGTTAGCAGTGATCCTTATGTTGTTATCAAGATGGGAAAACAGAAATTGAAGACCAGAGTAGTGAAGAAAAACATCAATCCTGAATGGAAAGAAGACCTAACGCTGTCCATCCAGGATCCCATTCTTCCGGTCAACTTGTTTGTATATGATAAGGATCTGTTCTCGCTTGACGATAAGATGGGGGATGCGGAATTCGACATCCATCCGTTCATGGAAGCAATAAGAATGAGACTGAACAACCTCCCAAGTGGAACAATCATAACAAGAATTCAACCAAGCAGAGAAAACTGCCTATCTGAGGAAAGCAGCATCATATGGGCAGATGGACAAGTGATCCAAAAACTGTTTCTGAGACTAAGAAATGTAGAATCTGGGGAAGTGGAACTGAAGTTGCAATGGATTGACATTCCTGGTTCAAGGGGAATATAG | 498 | 41.16 | MENFMGLLRIHISRGINLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNINPEWKEDLTLSIQDPILPVNLFVYDKDLFSLDDKMGDAEFDIHPFMEAIRMRLNNLPSGTIITRIQPSRENCLSEESSIIWADGQVIQKLFLRLRNVESGEVELKLQWIDIPGSRGI | 165 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 2628674 | 2629980 | - | evm.model.ptg000007l.420 | HCH9g0420 | 551052 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH9g0420 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
| HCH9g0420 | 165 | CDD | C2_ArfGAP | 6 | 148 | - | - | |
| HCH9g0420 | 165 | Gene3D | C2 domain | 4 | 160 | IPR035892 | - | |
| HCH9g0420 | 165 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| HCH9g0420 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 112 | IPR035892 | - | |
| HCH9g0420 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
| HCH9g0420 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH8g1117 | HCH-Chr8:46904233 | HCH9g0420 | HCH-Chr9:2628674 | 1.30E-65 | dispersed | |
| HCH10g1333 | HCH-Chr10:45866980 | HCH9g0420 | HCH-Chr9:2628674 | 7.10E-53 | wgd | |
| HCH3g0211 | HCH-Chr3:1352552 | HCH9g0420 | HCH-Chr9:2628674 | 2.30E-65 | wgd | |
| HCH3g1048 | HCH-Chr3:15067251 | HCH9g0420 | HCH-Chr9:2628674 | 2.20E-08 | wgd |
Pathway information